Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20sublineola_20[genbank_20GCA_5F000696135.1_202014- 05-27] 1,625 sequences; 46,755,813 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq277 91.5 1e-13 >seq277 Length=45443 Score = 91.5 bits (100), Expect = 1e-13 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 5357 ACCTCAAAGTCGCTGTTTCCGAAGTTAAACAGCACCACCCCGACATTGCCTCGGTAGTCT 5416 ||||| |||||| ||| || ||| || || | ||| ||| | ||| |||||||| Sbjct 3467 ACCTCGAAGTCGGTGTCGGCGTGGTTGAAGAGGAGGACCTTGACCTCGCCGCGGTAGTCG 3408 Query 5417 TCGTCGATAACGCCAGCGCCCACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGT 5476 ||||||| |||||||||||| |||||| |||| ||| | || |||||||| || || Sbjct 3407 GCGTCGATGACGCCAGCGCCCGTGTCGATGAAGTTCTTGGCAGCGAGGCCGGAGCGCGGG 3348 Query 5477 GCTATGCGTCCGT 5489 || ||||| |||| Sbjct 3347 GCGATGCGGCCGT 3335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447741305070000