Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20sublineola_20[genbank_20GCA_5F000696135.1_202014-
05-27] 1,625 sequences; 46,755,813 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq501 403 5e-107
>seq501
Length=177797
Score = 403 bits (446), Expect = 5e-107
Identities = 1072/1622 (66%), Gaps = 18/1622 (1%)
Strand=Plus/Plus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
||||| |||||| | || ||| | | ||| ||||| || | | ||||| ||||||||
Sbjct 147002 TTCACTCACGCCTCTCCTACACTCTTCAACGCTGGTACCCCCCAAGCACAGCTGTCTTCT 147061
Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666
||||| ||| | | ||||| || || || ||||||||||| | ||||| || ||||
Sbjct 147062 TGCTTCCTTGTCGACATGAAAGAGGACTCTATCGAGGGTATTTACGACACCCTCAAGACC 147121
Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725
|| || | || ||||||| || || || |||||| | | || ||||| | || ||
Sbjct 147122 TGCGCAATGATCTCCAAGATGGCTGGTGGCATTGGTCTCAACG-TCCACCGCATCCGCGC 147180
Query 363726 -ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTC 363784
|| | | ||||||| |||||| || ||| || || | ||||||||||| |
Sbjct 147181 TACCGG-CTCTTACATTGCCGGCACCAATGGCACCTCCAACGGTATCGTTCCCATGCTCC 147239
Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844
|||| ||| | || ||||| ||||||||||||||||||| ||||| || || |
Sbjct 147240 GTGTCTTTAATAACACTGCTCGGTACGTCGACCAGGGTGGCAACAAGCGTCCCGGTGCTT 147299
Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904
|||| || |||||||||||| || |||||| | || || ||| | || || ||||| |
Sbjct 147300 TTGCCATCTATCTCGAGCCTTGGCACGCCGATGTCTTCGACTTTTTAGATCTGCGGAAGA 147359
Query 363905 ACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964
|| || || || || | || || ||||| || ||| ||| |||||| | |||| |
Sbjct 147360 ACCATGGCAAGGAAGAGGTCCGCGCCCGTGACCTTTTCCTTGCTCTTTGGATCCCTGATC 147419
Query 363965 ATTTTATGAAGCGCGTGGAGGCAGGTAAGA-ATTGGTCACTCTTTTGCCCACACGAATGT 364023
|| |||||| | || || || || | ||| | || | ||||| | || ||
Sbjct 147420 TCTTCATGAAGAGAGTAGA-AAAGAACGGAGACTGGACTCTTATGTGCCCCAATGAGTGC 147478
Query 364024 CCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCG 364083
|| |||||| |||| | ||||| || | | || ||||||| ||||| ||| |
Sbjct 147479 CCTGGTCTTGCCGACTGCTACGGTGAGGAGTTCGAGGCCTTATACGAGAAGTACGAACAG 147538
Query 364084 GAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCG 364143
||| |||| ||| ||||| || || || ||||| |||| ||||||| | || |
Sbjct 147539 ATGGGCAAGGGTCGCAAGACTCTTAAGGCCCAAAAGCTCTGGTATGCCATCCTCGAGGCT 147598
Query 364144 CAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAAC 364203
|| | |||||||| | |||| ||| | ||||| ||| | ||||||||| ||||
Sbjct 147599 CAAACCGAGACAGGCAACCCCTTCATGCTCTACAAGGATGCTGCCAACCGCAAAAGCAAC 147658
Query 364204 CAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACAC 364262
||| || |||| ||||| | || | || |||||| || || ||||| ||||| ||| |
Sbjct 147659 CAGAAGAACCTGGGTACCA-TCCGTAGCTCCAACCTCTGCACTGAGATCATTGAGTACTC 147717
Query 364263 CGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT--- 364319
||| || |||||| || || |||||||| || ||| | || | || | || ||
Sbjct 147718 CGCGCCTGACGAGGTCGCTGTGTGTAACCTGGCCTCGCTTGCCTTGCCCACATTCGTTGA 147777
Query 364320 ---AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTG 364376
|| || ||| | ||| |||| | || | || || ||| | || | |
Sbjct 147778 CTACAACGAGGGTGTCTACGACTTCCAGAAGCTCCACGAGGTCACCCAGGTTGTCGTTCG 147837
Query 364377 CAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAA 364436
||| ||| ||| | || || || | || || | | || ||| ||
Sbjct 147838 CAACCTCAACAGAATCATTGATGTCAACCACTACCCGGTCCAGGAGGCCCGCAACAGCAA 147897
Query 364437 TATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCT 364496
||||| || ||||| |||||||| ||||| ||||| || || || | || || ||
Sbjct 147898 CATGCGCCACCGCCCCATTGGTCTCGGTGTGCAGGGTCTTGCGGATGCCTTCTTGGCTCT 147957
Query 364497 CAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAAT 364556
| ||| | || || || ||||| ||||||| || || ||| |||| || || |||||
Sbjct 147958 CCGCATGCCCTTCGAGTCTCCTGAAGCTCGTGACCTCAACAAGAAGATATTCGAGACAAT 148017
Query 364557 GTATTTTGCCGCAATGACTGCTTCGTGTG-ATTTGGCAAAAACCAAGGGAAAGTACTCTA 364615
|| ||| || | ||| ||| ||| | ||||| || |||| ||| |
Sbjct 148018 CTACCATGCTGCCCTTACTATGTCG-GTGCAGTTGGCTAAGGAGGAGGGTCCCTACCAGA 148076
Query 364616 CTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGC 364675
| || ||||| |||||| |||| ||||| | |||||| || | |||||||| | ||
Sbjct 148077 CGTACGAGGGTTCCCCTGTTTCTCAGGGCATTCTCCAGTACGACATGTGGAATGTTAAGC 148136
Query 364676 CATCTGTCCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGTACTCGC 364734
| || | | ||| ||||||| | || | | | | | ||| |||| ||| |||
Sbjct 148137 CCTCGGATCTCTGGGACTGGGACGCTCTGAAGGAGC-AGATCAAGCAGCACGGTGTCCGC 148195
Query 364735 AACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAAC 364794
||||| || | ||||||||||| || || || | |||||| | || |||||
Sbjct 148196 AACTCTCTGCTCGTCGCGCCCATGCCGACTGCCAGCACCTCTCAGATCTTGGGCAACAAT 148255
Query 364795 GAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTT 364854
||||||||||| || | || ||| |||| ||| || || ||| | || || |||
Sbjct 148256 GAGTGCTTCGAGCCCTACACCTCCAACATTTACCAACGTCGTGTCCTTGCTGGCGAGTTT 148315
Query 364855 CCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGC 364914
| || || || | || | ||||| || |||| || |||||| ||
Sbjct 148316 CAAGTCGTCAACCCTTGGCTCTTGAAGGACCTCGTCGACATGGGTCTGTGGTCCGATGCT 148375
Query 364915 ATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAA 364974
||||||||| |||||| |||| || |||||| | |||||||| || ||||
Sbjct 148376 ATGAAGAACCGTATCATTGCCGAGAACGGTTCTATCCAGAACATCCCCAACATTCCTACC 148435
Query 364975 GATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATG 365034
|| ||||| | | ||||| || || |||||||| ||| ||| || | | | |||
Sbjct 148436 GAGGTGAAGGCATTGTACAAGACTGTTTGGGAAATCTCCCAGCGTACCGTTGTACAGATG 148495
Query 365035 GCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAG 365094
|| ||||| || ||||| || ||| ||| ||||| ||||| | ||||| |
Sbjct 148496 GCTGCCGACCGTGGTGCCTTCATCGACCAGTCGCAGTCCCTTAACATCCACATGAAGGAC 148555
Query 365095 CCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACA 365154
|| || | |||| | || |||||| ||| || ||||| |||||| |||||
Sbjct 148556 CCGACTATGGGCAAGATCACCAGCATGCACTTCGCTGGCTGGAAGCTCGGTCTGAAGACG 148615
Query 365155 GG 365156
||
Sbjct 148616 GG 148617
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303326463770750
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