Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20sublineola_20[genbank_20GCA_5F000696135.1_202014-
05-27] 1,625 sequences; 46,755,813 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq501 230 3e-55
seq933 111 2e-19
>seq501
Length=177797
Score = 230 bits (254), Expect = 3e-55
Identities = 1159/1830 (63%), Gaps = 39/1830 (2%)
Strand=Plus/Minus
Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624
||||||||||||| || |||| || || ||||||||||| |||||||| || |
Sbjct 148664 TGAACTGAATGGGCGCAGCAGCAGCCTGTGTGCGCAGGTAGTACATGCCCGTCTTCAGAC 148605
Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 113684
| |||||||| || | ||||| || | |||| | || || | ||||
Sbjct 148604 CGAGCTTCCAGCCAGCGAAGTGCATGCTGGTGATCTTGCCCATAGTCGGGTCCTTCATGT 148545
Query 113685 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCA 113744
|| ||| | || || || ||||||||| ||||| || || ||||| | |
Sbjct 148544 GGATGTTAAGGGACTGCGACTGGTCGATGAAGGCACCACGGTCGGCAGCCATCTGTA--- 148488
Query 113745 CATCCTTCATCTTG---ATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGA 113801
|| | | || | |||||||| ||||| |||| | ||| | || || |
Sbjct 148487 CAACGGTACGCTGGGAGATTTCCCAAACAGTCTTGTACAATGCCTTCACCTCGGTAGGAA 148428
Query 113802 TATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGA---TCCTTCATATCCT 113858
| | ||| || ||||| || ||| || | | |||| | | ||||||| | |
Sbjct 148427 TGTTGGGGATGTTCTGGATAGA---ACCGTTCTCGGCAATGATACGGTTCTTCATAGCAT 148371
Query 113859 TTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACT 113918
||||| ||||| || | ||| |||| || ||| ||||| || |||||
Sbjct 148370 CGGACCACAGACCCATGTCGACGAGGTCCTTCAAGAGCCAAGGGTTGACGACTTGAAACT 148311
Query 113919 CACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGT 113978
| || || ||| || | | || || |||| ||||| ||||| |||||||||||||
Sbjct 148310 CGCCAGCAAGGACACGACGTTGGTAAATGTTGGAGGTGTAGGGCTCGAAGCACTCATTGT 148251
Query 113979 TACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGA 114038
| |||||||| || | |||| ||| || |||||||| || | ||| || ||| ||||
Sbjct 148250 TGCCCAAGATCTGAGAGGTGCTGGCAGTCGGCATGGGCGCGACGAGCAGAGAGTTGCGGA 148191
Query 114039 GACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCC 114098
||| | | | | || | ||||| || ||||||||||| || | | ||
Sbjct 148190 CACCGTGCTGCTTGATCTGCTCCTTCAGAGCGTCCCAGTCCCAGAGATCCGAGGGCTTAA 148131
Query 114099 CCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGT 114158
| | |||||| || ||||||| || || || || | || || ||||| | |||| ||
Sbjct 148130 CATTCCACATGTCGTACTGGAGAATGCCCTGAGAAACAGGGGAACCCTCGTACGTCTGGT 148071
Query 114159 ATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCG--AGGGCTGCGTGATACATTGT 114216
| || ||||| ||| ||||| | | | | | | ||||| || || || |||||
Sbjct 148070 AGGGACCCTCCTCCTTAGCCAA--CTGCACCGACATAGTAAGGGCAGCATGGTAGATTGT 148013
Query 114217 CTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAA 114276
||| || || || | | || || || || || | | |||
Sbjct 148012 CTCGAATATCTTCTTGTTGAGGTCACGAGCTTCAGGAGACTCGAAGGGCATGCGGAGAGC 147953
Query 114277 AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA 114336
| || ||||||| ||||| || |||||||| ||||| ||||| || | ||| ||
Sbjct 147952 CAAGAAGGCATCCGCAAGACCCTGCACACCGAGACCAATGGGGCGGTGGCGCATGTTGCT 147893
Query 114337 CTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGT 114396
|| || || || || || || || ||| || | || || || ||
Sbjct 147892 GTTGCGGGCCTCCTGGACCGGGTAGTGGTTGACATCAATGATTCTGTTGAGGTTGCGAAC 147833
Query 114397 GACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTG-- 114454
|||||||| |||| || || ||||| | | | || | | | ||| | | |
Sbjct 147832 GACAACCTGGGTGACCTCGTGGAGCTTCTGGAAGTCGTA---GACACCCTCGTTGTAGTC 147776
Query 114455 -ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGT 114513
|| | | || | ||| | || ||||| |||||||||| | ||| || | |
Sbjct 147775 AACGAATGTGGGCAAGGCAAGCGAGGCCAGGTTACACACAGCGACCTCGTCAGGCGCGGA 147716
Query 114514 GTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 114573
|||||| || || || || || | || || || ||||| |||| |||||| || |
Sbjct 147715 GTACTCAATGATCTCAGTGCAGAGGTTGGAGCTACGGATGGTACCCAGGTTCTTCTG-GT 147657
Query 114574 TGACTTTG-TGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGG 114632
|| |||| ||| ||||||||||| |||||| | || | || ||||| ||||| |
Sbjct 147656 TGCTTTTGCGGTTGGCAGCATCCTTGTAGAGCATGAAGGGGTTGCCTGTCTCGGTTTGAG 147597
Query 114633 ACTTGAGAATAGCCTTCCAGACATCGGCGGCTGGCACAG--TGGCGTTGGCTCGCCCCTC 114690
|| ||| || || | ||||| | ||| | || | ||| || |||| |
Sbjct 147596 CCTCGAGGATGGCATACCAGAGCTTTTGGGCCTTAAGAGTCTTGCG-ACCCTTGCCCAT- 147539
Query 114691 CTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGG 114750
|| |||||||| ||| | ||| || ||||| ||||| | || | || || ||
Sbjct 147538 CTGTTCGTACTTCTCGTATAAGGCCTCGAACTCCTCACCGTAGCAGTCGGCAAGACCAGG 147479
Query 114751 TGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAG 114810
|| || ||||| | |||| ||| | || || || || | ||||||||||||
Sbjct 147478 GCACTCATTGGGGCACATAAGAGTCCAGTCTCCGTTCTTTTCTACTCTCTTCATGAAGAG 147419
Query 114811 GTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATT 114870
|| |||||||| ||||| ||| || || || ||| | ||||| | || || ||
Sbjct 147418 ATCAGGGATCCAAAGAGCAAGGAAAAGGTCACGGGCGCGGACCTCTTCCTTGCCATGGTT 147359
Query 114871 GAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGAT 114930
|||| || |||||||| | || ||| |||||||| || || || || | || |
Sbjct 147358 CTTCCGCAGATCTAAAAAGTCGAAGACATCGGCGTGCCAAGGCTCGAGATAGATGGCAAA 147299
Query 114931 TGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCG 114987
| || ||| ||| |||||| || |||| || ||| |||||| || ||
Sbjct 147298 AGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTACCGAGCAGTGTTATTAAAGACACG 147239
Query 114988 AAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGC 115047
||||| |||| |||||| | || |||||| || || ||| ||| | ||
Sbjct 147238 GAGCATGGGAACGATACCGTTGGAGGTGCCATTGGTGCCGGCAATGTAAGAGCCGGTAGC 147179
Query 115048 TCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTC 115107
| || |||| || | |||||| || || ||| ||| ||||| |||||
Sbjct 147178 GCGGATGCGGTGGACGTTGAGACCAATGCCACCAGCCATCTTGGAGATCATTGCGCAGGT 147119
Query 115108 CGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCT 115167
| |||| || |||| || || ||||| ||||| | || | ||| |||||||||
Sbjct 147118 CTTGAGGGTGTCGTAAATACCCTCGATAGAGTCCTCTTTCATGTCGACAAGGAAGCAAGA 147059
Query 115168 CGACATTTGTGGCCTT--GGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAAC 115225
|||| |||| ||| || ||||||||||||||||| || || | ||||| |||
Sbjct 147058 AGACAGCTGTG--CTTGGGGGGTACCAGCGTTGAAGAGTGTAGGAGAGGCGTGAGTGA-- 147003
Query 115226 ATACCTTG--GGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAA 115283
| | |||| |||||| | ||||||||| | |||| || || || || |
Sbjct 147002 AGAACTTGCTCGACATCAGGTTGTAGGTCTCGATGACGCGCTCAACGTTGTCACCCCAGA 146943
Query 115284 TACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCC 115343
| || | | ||| ||||| | ||||| |||||| | || | | || || |||
Sbjct 146942 TGCCAACAGCGACACGCATGATCATGTGCTGGGGTCTCTCGGCAATCTTGCCGTCAAGCT 146883
Query 115344 TCTGGAGGTAACTCTTCTCCAAGGTCTTGA 115373
|| ||||||| |||||||||||||||
Sbjct 146882 TCAGGAGGTACGATCTCTCCAAGGTCTTGA 146853
>seq933
Length=137956
Score = 111 bits (122), Expect = 2e-19
Identities = 303/460 (66%), Gaps = 18/460 (4%)
Strand=Plus/Minus
Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817
|||||| |||| ||||| || |||||||| ||||| || ||| | ||||||||||||
Sbjct 11531 GTAGTCGGCAACACGCTTTTCAAAGAAGTTGGTCTTGCCACCCAGGGAGATATTCTCCAT 11472
Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCC-CAATCTGTTTGAG 125871
||| || || ||||| || || ||| | |||| || ||| | |
Sbjct 11471 AAAGTCGAAGGGGTTGGAAGACTTGTAAACCTTGTCGTTGCCAAGAGCAACC------AA 11418
Query 125872 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 125931
||| || || | |||| |||||||||||| |||| | |||||||| || | ||
Sbjct 11417 GAGGCGGTCGGCGACGAACTCAATGTACTGCTTCATCAGGTTGGAGTTCATGCCAAGCAG 11358
Query 125932 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGAT 125991
| || || || || ||| | |||| ||| |||||| | ||||| || | |||
Sbjct 11357 GGCGCAAGGAAGGGCCTCCGTCAGGAACTCCTGCTCAATCTTGACGGCATCGACAATGAT 11298
Query 125992 GGCGTGAATGGTGTCCACCCCAGGTC---TATTGCGCAAAGTCTTGAAGAGTTCCACGGC 126048
| | | || | | | || | | ||| | | | | ||| || |||
Sbjct 11297 GTCCTCGATAACCTGCTTGCTGGGGCGGTTCTTGAGGTGGGAGTACAGGAGG--CA-GGC 11241
Query 126049 AAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGG 126108
|| || ||| |||||||||||||| |||||||| || || ||||| ||| || ||
Sbjct 11240 GAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAATGTCAGACCGGG 11181
Query 126109 CATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCC 126168
|||||| || |||||||| | |||||| || | || | ||| |||||| || ||
Sbjct 11180 CATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCACTGAAGAAAATACC 11121
Query 126169 CTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAG 126208
||| ||| ||||| |||| | ||||| ||| ||||||
Sbjct 11120 CTCGACAGCAGCGAAGGCAACCAAACGCTGAGCGAAGGAG 11081
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597341466255000
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