Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20sublineola_20[genbank_20GCA_5F000696135.1_202014-
05-27] 1,625 sequences; 46,755,813 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq501 98.7 9e-16
>seq501
Length=177797
Score = 98.7 bits (108), Expect = 9e-16
Identities = 155/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 124098 GGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGACTGGAGCGTT 124157
|| ||| | ||||||||||||||||||| || || | || | ||||||||| || |
Sbjct 148103 GGCATTCTCCAGTACGACATGTGGAATGTTAAGCCCTCGGATCTCTGGGACTGGGACGCT 148162
Query 124158 TTAAAACAACGCATATC--GACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGC 124215
| || | ||| ||| | ||||||| | || ||||| ||| | || ||| |||||
Sbjct 148163 CTGAAGGA--GCAGATCAAGCAGCACGGTGTCCGCAACTCTCTGCTCGTCGCGCCCATGC 148220
Query 124216 CGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACA 124275
|||| || | ||| |||| || || || ||||| || | ||||||||| | ||| ||
Sbjct 148221 CGACTGCCAGCACCTCTCAGATCTTGGGCAACAATGAGTGCTTCGAGCCCTACACCTCCA 148280
Query 124276 ATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGT 124315
| | ||| || || || | || ||||| ||||||||
Sbjct 148281 ACATTTACCAACGTCGTGTCCTTGCTGGCGAGTTTCAAGT 148320
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451994018685000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |