Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20sublineola_20[genbank_20GCA_5F000696135.1_202014- 05-27] 1,625 sequences; 46,755,813 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq501 98.7 9e-16 >seq501 Length=177797 Score = 98.7 bits (108), Expect = 9e-16 Identities = 155/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 124098 GGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGACTGGAGCGTT 124157 || ||| | ||||||||||||||||||| || || | || | ||||||||| || | Sbjct 148103 GGCATTCTCCAGTACGACATGTGGAATGTTAAGCCCTCGGATCTCTGGGACTGGGACGCT 148162 Query 124158 TTAAAACAACGCATATC--GACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGC 124215 | || | ||| ||| | ||||||| | || ||||| ||| | || ||| ||||| Sbjct 148163 CTGAAGGA--GCAGATCAAGCAGCACGGTGTCCGCAACTCTCTGCTCGTCGCGCCCATGC 148220 Query 124216 CGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACA 124275 |||| || | ||| |||| || || || ||||| || | ||||||||| | ||| || Sbjct 148221 CGACTGCCAGCACCTCTCAGATCTTGGGCAACAATGAGTGCTTCGAGCCCTACACCTCCA 148280 Query 124276 ATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGT 124315 | | ||| || || || | || ||||| |||||||| Sbjct 148281 ACATTTACCAACGTCGTGTCCTTGCTGGCGAGTTTCAAGT 148320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451994018685000