Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20sublineola_20[genbank_20GCA_5F000696135.1_202014-
05-27] 1,625 sequences; 46,755,813 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq1539 96.9 3e-15
>seq1539
Length=122776
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
||||| || || || || || || ||||| || | | ||| | |||| |||| |||
Sbjct 51024 TGAAGAGTTGACTCCTTCTGAATGTTGTAGTCAGACAAAGTGCGACCATCTTCCAGCTGC 50965
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || || || ||||||||||| || ||||| |||||||| || || || ||||| ||
Sbjct 50964 TTTCCGGCGAAAATCAAACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTG 50905
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| || | || | ||||| || | ||| || || || |||| || || || ||
Sbjct 50904 GACTTCACGTTGTCGATCGTGTCCGATGATTCGACCTCCAGCGTGATTGTCTTTCCAGTC 50845
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
|| || || || || ||||||||
Sbjct 50844 AATGTCTTGACGAAGATCTGCAT 50822
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396270551830125
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |