Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20sublineola_20[genbank_20GCA_5F000696135.1_202014-
05-27] 1,625 sequences; 46,755,813 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq1539 96.9 2e-14
>seq1539
Length=122776
Score = 96.9 bits (106), Expect = 2e-14
Identities = 154/221 (70%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| |||||||| || | ||||| || ||| || | || || || | |||||
Sbjct 50815 ACGGAGACGGAGCACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCCGAGAGAGT 50756
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| | ||| ||||| ||||| |||||||| || | ||||| ||||||||||| || ||
Sbjct 50755 GCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAAGCGTTGCTGATCAGGAGGGATGCC 50696
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730
||||||||| |||||||| |||||| || || ||||||| | | || ||
Sbjct 50695 TTCCTTGTCCTGAATCTTAGACTTGACATTGTCGATGGTATCAGAGGACTCAACCTCGAG 50636
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTGGA 480771
|| || || || || || || ||||| |||| ||||||
Sbjct 50635 AGTGATGGTCTTGCCAGTAAGGGTCTTGACGACTGTTTGGA 50595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268109495865500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |