Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20sublineola_20[genbank_20GCA_5F000696135.1_202014-
05-27] 1,625 sequences; 46,755,813 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq933 102 3e-16
>seq933
Length=137956
Score = 102 bits (112), Expect = 3e-16
Identities = 129/176 (73%), Gaps = 1/176 (1%)
Strand=Plus/Plus
Query 443699 CTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTT 443758
||||| |||| | || || || |||| ||||| || | || || || || || |
Sbjct 11084 CTTCGCTCAGCGTTTGGTTGCCTTCGCTGCTGTCGAGGGTATTTTCTTCAGTGGT-GCCT 11142
Query 443759 TAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACG 443818
| ||||||||||||||| | || ||||| || || |||| ||||||||| || ||||
Sbjct 11143 TCGCCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTGACATTCTCCAACG 11202
Query 443819 AACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACACC 443874
| || ||| ||| ||||||||| |||| |||||||||||| || || ||| ||
Sbjct 11203 AGCTCATCTCTCGTGACGAGGGTCTGCACACCGACTTCGCCTGCCTCCTGTACTCC 11258
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588302930348125
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |