Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20sublineola_20[genbank_20GCA_5F001951195.1_202017-
01-13] 548 sequences; 64,848,627 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq7 156 5e-33
>seq7
Length=993837
Score = 156 bits (172), Expect = 5e-33
Identities = 411/630 (65%), Gaps = 48/630 (8%)
Strand=Plus/Plus
Query 145680 CTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTC 145739
||| |||| || || |||| | |||||||| || || |||| |||||| | | |
Sbjct 489648 CTTGAGGGCATCGACATGGTCGGCATAGACGTGTGCATCGCCCATGACGTGTGTCAGGCT 489707
Query 145740 CCCGGGCTCGAGGCC-CGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTA 145798
|| || | ||| | | || | | || | ||| | |||||||| | |||||| || |
Sbjct 489708 GCCAGGGACAAGGTCGCATGCGC-GAGCAATCATATGCGTCAGCAGCGCGTAGCTCGCGA 489766
Query 145799 TGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCT 145858
||||||| ||||| || || |||||||| | || ||||| |||||||||||| || |
Sbjct 489767 TGTTGAAAGGCACTCCGAGGCCCATGTCACAGGACCGCTGATACAGCTGGCAGTGCAGGT 489826
Query 145859 --CCC--------------------------------CGCCCGCC--------ACGTAGA 145876
||| ||||||| |||||||
Sbjct 489827 GGCCCTTGGGCTTCTCCGCGTCGACGGATGCGTTGCGCGCCCGCGGGTAAGAGACGTAGA 489886
Query 145877 ACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGG 145936
||||| | | |||||| || ||||||||||| | |||||||||||||| |
Sbjct 489887 ACTGGGCAAACATGTGGCATGGTGGCAGGGCCATCTTCTTTAAATCCGCCGGGTTCCACG 489946
Query 145937 CGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGA 145996
|| |||||| || | | | | |||||| |||||| || || | || |
Sbjct 489947 CGCTGAGGAGGATGCGGCGGTCATACGGGTTCGTCTTGAGCTTGTGGATAACCTCGGCAA 490006
Query 145997 GCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGT 146056
||||||| ||||| || ||| || || ||||||| ||| |||||| |||| || ||||
Sbjct 490007 GCTGGTCGACGCCTTGGCCCGTATAGTCCGTCTTGGCGTCGACGTACTCGGCGCCAAAGT 490066
Query 146057 GCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGG 146116
| | ||| |||||||| |||||||| || ||||| ||| || | || || |||
Sbjct 490067 GTCGCCATTGGAACCCATAGACGGGGCCGAGGTCGCCGACTTCTCGATGAGAGAGGCCGA 490126
Query 146117 CCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGGA 146174
| | ||||||| || || || |||||| ||||||| ||||||||||| |||||| |
Sbjct 490127 CGCTATCGAGGAACTCGCGCGAGCCGTTGCCGTCCCAAATCTTGACGCCCGCCTCGCTCA 490186
Query 146175 GAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCT 146234
| | || ||| ||| ||| || |||||| |||||||| | | ||| | |
Sbjct 490187 GCG-GCA-GAGAGGATGTGTTGCCCTCGACGAACCACAGCAGCTCGGCAATGACGGCACG 490244
Query 146235 CCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264
|||||| | ||| || || || |||||
Sbjct 490245 AAGGAAGACGCGCTTCGTAGTGAGGAGGGG 490274
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590072757973920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |