Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20sublineola_20[genbank_20GCA_5F001951195.1_202017- 01-13] 548 sequences; 64,848,627 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq7 156 5e-33 >seq7 Length=993837 Score = 156 bits (172), Expect = 5e-33 Identities = 411/630 (65%), Gaps = 48/630 (8%) Strand=Plus/Plus Query 145680 CTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTC 145739 ||| |||| || || |||| | |||||||| || || |||| |||||| | | | Sbjct 489648 CTTGAGGGCATCGACATGGTCGGCATAGACGTGTGCATCGCCCATGACGTGTGTCAGGCT 489707 Query 145740 CCCGGGCTCGAGGCC-CGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTA 145798 || || | ||| | | || | | || | ||| | |||||||| | |||||| || | Sbjct 489708 GCCAGGGACAAGGTCGCATGCGC-GAGCAATCATATGCGTCAGCAGCGCGTAGCTCGCGA 489766 Query 145799 TGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCT 145858 ||||||| ||||| || || |||||||| | || ||||| |||||||||||| || | Sbjct 489767 TGTTGAAAGGCACTCCGAGGCCCATGTCACAGGACCGCTGATACAGCTGGCAGTGCAGGT 489826 Query 145859 --CCC--------------------------------CGCCCGCC--------ACGTAGA 145876 ||| ||||||| ||||||| Sbjct 489827 GGCCCTTGGGCTTCTCCGCGTCGACGGATGCGTTGCGCGCCCGCGGGTAAGAGACGTAGA 489886 Query 145877 ACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGG 145936 ||||| | | |||||| || ||||||||||| | |||||||||||||| | Sbjct 489887 ACTGGGCAAACATGTGGCATGGTGGCAGGGCCATCTTCTTTAAATCCGCCGGGTTCCACG 489946 Query 145937 CGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGA 145996 || |||||| || | | | | |||||| |||||| || || | || | Sbjct 489947 CGCTGAGGAGGATGCGGCGGTCATACGGGTTCGTCTTGAGCTTGTGGATAACCTCGGCAA 490006 Query 145997 GCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGT 146056 ||||||| ||||| || ||| || || ||||||| ||| |||||| |||| || |||| Sbjct 490007 GCTGGTCGACGCCTTGGCCCGTATAGTCCGTCTTGGCGTCGACGTACTCGGCGCCAAAGT 490066 Query 146057 GCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGG 146116 | | ||| |||||||| |||||||| || ||||| ||| || | || || ||| Sbjct 490067 GTCGCCATTGGAACCCATAGACGGGGCCGAGGTCGCCGACTTCTCGATGAGAGAGGCCGA 490126 Query 146117 CCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGGA 146174 | | ||||||| || || || |||||| ||||||| ||||||||||| |||||| | Sbjct 490127 CGCTATCGAGGAACTCGCGCGAGCCGTTGCCGTCCCAAATCTTGACGCCCGCCTCGCTCA 490186 Query 146175 GAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCT 146234 | | || ||| ||| ||| || |||||| |||||||| | | ||| | | Sbjct 490187 GCG-GCA-GAGAGGATGTGTTGCCCTCGACGAACCACAGCAGCTCGGCAATGACGGCACG 490244 Query 146235 CCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264 |||||| | ||| || || || ||||| Sbjct 490245 AAGGAAGACGCGCTTCGTAGTGAGGAGGGG 490274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590072757973920