Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20sublineola_20[genbank_20GCA_5F001951195.1_202017-
01-13] 548 sequences; 64,848,627 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq7 96.9 3e-15
>seq7
Length=993837
Score = 96.9 bits (106), Expect = 3e-15
Identities = 127/172 (74%), Gaps = 8/172 (5%)
Strand=Plus/Plus
Query 20925 AGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAG--GTGTGCACAAAGTCTC 20982
|||| ||| || |||| | || ||||| || || |||| | ||||| || ||
Sbjct 489652 AGGGCATCGACATGGTCGGCATAGACGTGTGCATCGCCCATGACGTGTGTC---AGGCTG 489708
Query 20983 CCGGGGTCAGGCCCG--TGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGAT 21040
|| ||| || | || || || |||| |||| || |||||| || |||||||| |||||
Sbjct 489709 CCAGGGACAAGGTCGCATG-CGCGAGCAATCATATGCGTCAGCAGCGCGTAGCTCGCGAT 489767
Query 21041 GTTAAACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAG 21092
||| || || || |||||||||||||| ||||| ||| ||||||||||||
Sbjct 489768 GTTGAAAGGCACTCCGAGGCCCATGTCACAGGACCGCTGATACAGCTGGCAG 489819
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427773142991040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |