Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20sublineola_20[genbank_20GCA_5F001951195.1_202017-
01-13] 548 sequences; 64,848,627 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq54 95.1 1e-14
>seq54
Length=312047
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || | ||||| || | ||| | || ||||| || || ||||| || ||| |
Sbjct 98810 CCACCACGCAGACGCAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 98751
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| ||| |||||||| || || || ||||||| || ||||| ||||| ||
Sbjct 98750 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGG 98691
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
||||| || ||||| ||| || || | | || | ||||||| | |||||||
Sbjct 98690 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGACGACTCCACC 98631
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|||| ||| | ||||| || || | || || ||||| || |||||
Sbjct 98630 TCAAGGGTGATAGTCTTACCCGTGAGGGTCTTCACGAAGATCTGCAT 98584
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496060601961600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |