Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20sublineola_20[genbank_20GCA_5F001951195.1_202017- 01-13] 548 sequences; 64,848,627 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq20 91.5 1e-13 >seq20 Length=648914 Score = 91.5 bits (100), Expect = 1e-13 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 5357 ACCTCAAAGTCGCTGTTTCCGAAGTTAAACAGCACCACCCCGACATTGCCTCGGTAGTCT 5416 ||||| |||||| ||| || ||| || || | ||| ||| | ||| |||||||| Sbjct 87053 ACCTCGAAGTCGGTGTCGGCGTGGTTGAAGAGGAGGACCTTGACCTCGCCGCGGTAGTCG 86994 Query 5417 TCGTCGATAACGCCAGCGCCCACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGT 5476 ||||||| |||||||||||| |||||| |||| ||| | || |||||||| || || Sbjct 86993 GCGTCGATGACGCCAGCGCCCGTGTCGATGAAGTTCTTGGCAGCGAGGCCGGAGCGCGGG 86934 Query 5477 GCTATGCGTCCGT 5489 || ||||| |||| Sbjct 86933 GCGATGCGGCCGT 86921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447747332909760