Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20sublineola_20[genbank_20GCA_5F001951195.1_202017-
01-13] 548 sequences; 64,848,627 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq11 232 8e-56
seq6 111 2e-19
>seq11
Length=827760
Score = 232 bits (256), Expect = 8e-56
Identities = 1162/1832 (63%), Gaps = 43/1832 (2%)
Strand=Plus/Plus
Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624
||||||||||||| || |||| || || ||||||||||| |||||||| || |
Sbjct 609328 TGAACTGAATGGGCGCAGCAGCAGCCTGTGTGCGCAGGTAGTACATGCCCGTCTTCAGAC 609387
Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 113684
| |||||||| || | ||||| || | |||| | || || | ||||
Sbjct 609388 CGAGCTTCCAGCCAGCGAAGTGCATGCTGGTGATCTTGCCCATAGTCGGGTCCTTCATGT 609447
Query 113685 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCA 113744
|| ||| | || || || ||||||||| ||||| || || ||||| | |
Sbjct 609448 GGATGTTAAGGGACTGCGACTGGTCGATGAAGGCACCACGGTCGGCAGCCATCTGTA--- 609504
Query 113745 CATCCTTCATCTTG---ATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGA 113801
|| | | || | |||||||| ||||| |||| | ||| | || || |
Sbjct 609505 CAACGGTACGCTGGGAGATTTCCCAAACAGTCTTGTACAATGCCTTCACCTCGGTAGGAA 609564
Query 113802 TATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGA---TCCTTCATATCCT 113858
| | ||| || ||||| || ||| || | | |||| | | ||||||| | |
Sbjct 609565 TGTTGGGGATGTTCTGGATAGA---ACCGTTCTCGGCAATGATACGGTTCTTCATAGCAT 609621
Query 113859 TTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATGCTTATTGACAACAACAAA 113916
||||| ||||| || | ||| |||| || ||| ||| | |||| || |||
Sbjct 609622 CGGACCACAGACCCATGTCGACGAGGTCCTTCAAGAGCCATGGGT--TGACGACTTGAAA 609679
Query 113917 CTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATT 113976
||| || || ||| || | | || || |||| ||||| ||||| |||||||||||
Sbjct 609680 CTCGCCAGCAAGGACACGACGTTGGTAAATGTTGGAGGTGTAGGGCTCGAAGCACTCATT 609739
Query 113977 GTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACG 114036
||| |||||||| || | |||| ||| || |||||||| || | ||| || ||| ||
Sbjct 609740 GTTGCCCAAGATCTGAGAGGTGCTGGCAGTCGGCATGGGCGCGACGAGCAGAGAGTTGCG 609799
Query 114037 GAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTC 114096
|| ||| | | | | || | ||||| || ||||||||||| || | | ||
Sbjct 609800 GACACCGTGCTGCTTGATCTGCTCCTTCAGAGCGTCCCAGTCCCAGAGATCCGAGGGCTT 609859
Query 114097 CCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTC 114156
| | |||||| || ||||||| || || || || | || || ||||| | ||||
Sbjct 609860 AACATTCCACATGTCGTACTGGAGAATGCCCTGAGAAACAGGGGAACCCTCGTACGTCTG 609919
Query 114157 GTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCG--AGGGCTGCGTGATACATT 114214
||| || ||||| ||| ||||| | | | | | | ||||| || || || |||
Sbjct 609920 GTAGGGACCCTCCTCCTTAGCCAA--CTGCACCGACATAGTAAGGGCAGCATGGTAGATT 609977
Query 114215 GTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCAC 114274
||||| || || || | | || || || || || | | |||
Sbjct 609978 GTCTCGAATATCTTCTTGTTGAGGTCACGAGCTTCAGGAGACTCGAAGGGCATGCGGAGA 610037
Query 114275 AAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTA 114334
| || ||||||| ||||| || |||||||| ||||| ||||| || | ||| ||
Sbjct 610038 GCCAAGAAGGCATCCGCAAGACCCTGCACACCGAGACCAATGGGGCGGTGGCGCATGTTG 610097
Query 114335 GACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTG 114394
|| || || || || || || || ||| || | || || || ||
Sbjct 610098 CTGTTGCGGGCCTCCTGGACCGGGTAGTGGTTGACATCAATGATTCTGTTGAGGTTGCGA 610157
Query 114395 GTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTG 114454
|||||||| |||| || || ||||| | | | || | | | ||| | | |
Sbjct 610158 ACGACAACCTGGGTGACCTCGTGGAGCTTCTGGAAGTCGTA---GACACCCTCGTTGTAG 610214
Query 114455 ---ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCA 114511
|| | | || | ||| | || ||||| |||||||||| | ||| || |
Sbjct 610215 TCAACGAATGTGGGCAAGGCAAGCGAGGCCAGGTTACACACAGCGACCTCGTCAGGCGCG 610274
Query 114512 GTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 114571
| |||||| || || || || || | || || || ||||| |||| |||||| ||
Sbjct 610275 GAGTACTCAATGATCTCAGTGCAGAGGTTGGAGCTACGGATGGTACCCAGGTTCTTCTG- 610333
Query 114572 TTTGACTTTG-TGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTG 114630
||| |||| ||| ||||||||||| |||||| | || | || ||||| |||||
Sbjct 610334 GTTGCTTTTGCGGTTGGCAGCATCCTTGTAGAGCATGAAGGGGTTGCCTGTCTCGGTTTG 610393
Query 114631 GGACTTGAGAATAGCCTTCCAGACATCGGCGGCTGGCACAG--TGGCGTTGGCTCGCCCC 114688
| || ||| || || | ||||| | ||| | || | ||| || ||||
Sbjct 610394 AGCCTCGAGGATGGCATACCAGAGCTTTTGGGCCTTAAGAGTCTTGCG-ACCCTTGCCCA 610452
Query 114689 TCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCT 114748
| || |||||||| ||| | ||| || ||||| ||||| | || | || ||
Sbjct 610453 T-CTGTTCGTACTTCTCGTATAAGGCCTCGAACTCCTCACCGTAGCAGTCGGCAAGACCA 610511
Query 114749 GGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAG 114808
|| || || ||||| | |||| ||| | || || || || | ||||||||||
Sbjct 610512 GGGCACTCATTGGGGCACATAAGAGTCCAGTCTCCGTTCTTTTCTACTCTCTTCATGAAG 610571
Query 114809 AGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGA 114868
|| || |||||||| ||||| ||| || || || ||| | ||||| | || ||
Sbjct 610572 AGATCAGGGATCCAAAGAGCAAGGAAAAGGTCACGGGCGCGGACCTCTTCCTTGCCATGG 610631
Query 114869 TTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCG 114928
|| |||| || |||||||| | || ||| |||||||| || || || || | ||
Sbjct 610632 TTCTTCCGCAGATCTAAAAAGTCGAAGACATCGGCGTGCCAAGGCTCGAGATAGATGGCA 610691
Query 114929 ATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACG 114985
| | || ||| ||| |||||| || |||| || ||| |||||| ||
Sbjct 610692 AAAGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTACCGAGCAGTGTTATTAAAGACA 610751
Query 114986 CGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTG 115045
|| ||||| |||| |||||| | || |||||| || || ||| ||| |
Sbjct 610752 CGGAGCATGGGAACGATACCGTTGGAGGTGCCATTGGTGCCGGCAATGTAAGAGCCGGTA 610811
Query 115046 GCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCAC 115105
|| | || |||| || | |||||| || || ||| ||| ||||| |||||
Sbjct 610812 GCGCGGATGCGGTGGACGTTGAGACCAATGCCACCAGCCATCTTGGAGATCATTGCGCAG 610871
Query 115106 TCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAG 115165
| |||| || |||| || || ||||| ||||| | || | ||| |||||||||
Sbjct 610872 GTCTTGAGGGTGTCGTAAATACCCTCGATAGAGTCCTCTTTCATGTCGACAAGGAAGCAA 610931
Query 115166 CTCGACATTTGTGGCCTT--GGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGA 115223
|||| |||| ||| || ||||||||||||||||| || || | ||||| |||
Sbjct 610932 GAAGACAGCTGTG--CTTGGGGGGTACCAGCGTTGAAGAGTGTAGGAGAGGCGTGAGTGA 610989
Query 115224 ACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTG 115281
| | |||| |||||| | ||||||||| | |||| || || || ||
Sbjct 610990 --AGAACTTGCTCGACATCAGGTTGTAGGTCTCGATGACGCGCTCAACGTTGTCACCCCA 611047
Query 115282 AATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAG 115341
|| || | | ||| ||||| | ||||| |||||| | || | | || || ||
Sbjct 611048 GATGCCAACAGCGACACGCATGATCATGTGCTGGGGTCTCTCGGCAATCTTGCCGTCAAG 611107
Query 115342 CCTCTGGAGGTAACTCTTCTCCAAGGTCTTGA 115373
| || ||||||| |||||||||||||||
Sbjct 611108 CTTCAGGAGGTACGATCTCTCCAAGGTCTTGA 611139
>seq6
Length=1110370
Score = 111 bits (122), Expect = 2e-19
Identities = 303/460 (66%), Gaps = 18/460 (4%)
Strand=Plus/Minus
Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817
|||||| |||| ||||| || |||||||| ||||| || ||| | ||||||||||||
Sbjct 71535 GTAGTCGGCAACACGCTTTTCAAAGAAGTTGGTCTTGCCACCCAGGGAGATATTCTCCAT 71476
Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCC-CAATCTGTTTGAG 125871
||| || || ||||| || || ||| | |||| || ||| | |
Sbjct 71475 AAAGTCGAAGGGGTTGGAAGACTTGTAAACCTTGTCGTTGCCAAGAGCAACC------AA 71422
Query 125872 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 125931
||| || || | |||| |||||||||||| |||| | |||||||| || | ||
Sbjct 71421 GAGGCGGTCGGCGACGAACTCAATGTACTGCTTCATCAGGTTGGAGTTCATGCCAAGCAG 71362
Query 125932 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGAT 125991
| || || || || ||| | |||| ||| |||||| | ||||| || | |||
Sbjct 71361 GGCGCAAGGAAGGGCCTCCGTCAGGAACTCCTGCTCAATCTTGACGGCATCGACAATGAT 71302
Query 125992 GGCGTGAATGGTGTCCACCCCAGGTC---TATTGCGCAAAGTCTTGAAGAGTTCCACGGC 126048
| | | || | | | || | | ||| | | | | ||| || |||
Sbjct 71301 GTCCTCGATAACCTGCTTGCTGGGGCGGTTCTTGAGGTGGGAGTACAGGAGG--CA-GGC 71245
Query 126049 AAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGG 126108
|| || ||| |||||||||||||| |||||||| || || ||||| ||| || ||
Sbjct 71244 GAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAATGTCAGACCGGG 71185
Query 126109 CATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCC 126168
|||||| || |||||||| | |||||| || | || | ||| |||||| || ||
Sbjct 71184 CATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCACTGAAGAAAATACC 71125
Query 126169 CTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAG 126208
||| ||| ||||| |||| | ||||| ||| ||||||
Sbjct 71124 CTCGACAGCAGCGAAGGCAACCAAACGCTGAGCGAAGGAG 71085
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597349508127840
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