Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20sublineola_20[genbank_20GCA_5F001951195.1_202017-
01-13] 548 sequences; 64,848,627 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq11 313 2e-80
>seq11
Length=827760
Score = 313 bits (346), Expect = 2e-80
Identities = 1075/1664 (65%), Gaps = 24/1664 (1%)
Strand=Plus/Minus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||| | |||||| || |||||| ||||||||||| ||| | || |||
Sbjct 611158 AACTACCAATACTTCGGCTTCAAGACCTTGGAGAGATCGTACCTCCTGAAGCTTGACGGC 611099
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| | || ||||| |||| || || || | ||||| ||||| | || || || ||
Sbjct 611098 AAGATTGCCGAGAGACCCCAGCACATGATCATGCGTGTCGCTGTTGGCATCTGGGGTGAC 611039
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894
|| | | || | | | | || ||| | |||| | || |||
Sbjct 611038 AACGTTGAGCGCGTCATCGAGACCTACAACCTGATGTCGAGCAAGTTCTTCACTCACGCC 610979
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953
| || || || |||||||| || ||||| ||||| ||||||| || ||||| |
Sbjct 610978 TCTCCTACACTCTTCAACGCTGGTACCCCCCAAGCACAGCTGTCTTCTTGCTTCCTTGTC 610919
Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013
||| | || | ||||| ||| || |||| ||||| ||||||| ||| || | ||
Sbjct 610918 GAC-ATGAAAGAGGACTCTATCGAGGGTATTTACGACACCCTCAAGACCTGCGCAATGAT 610860
Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073
||| || || || || || || ||| |||||| | | || || | || || ||
Sbjct 610859 CTCCAAGATGGCTGGTGGCATTGGTCTCAACGTCCACCGCATCCGCGCTACCGGCTCTTA 610800
Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133
||| ||| |||||||||||||||||||| |||| || |||||||| ||||| || ||
Sbjct 610799 CATTGCCGGCACCAATGGCACCTCCAACGGTATCGTTCCCATGCTCCGTGTCTTTAATAA 610740
Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193
| | || || ||||| ||||||||||| | | | ||| |||| || |||||||
Sbjct 610739 CACTGCTCGGTACGTCGACCAGGGTGGCAACAAGCGTCCCGGTGCTTTTGCCATCTATCT 610680
Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253
|||||| |||||||| || || | || | || ||||| |||||||| ||||| ||
Sbjct 610679 CGAGCCTTGGCACGCCGATGTCTTCGACTTTTTAGATCTGCGGAAGAACCATGGCAAGGA 610620
Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313
|| | ||| | ||||| ||| ||||| ||| | || || || || ||||| |
Sbjct 610619 AGAGGTCCGCGCCCGTGACCTTTTCCTTGCTCTTTGGATCCCTGATCTCTTCATGAAGAG 610560
Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373
|| || || ||| | ||||| |||| | || |||||||| || || || || ||||
Sbjct 610559 AGTAGAAAAGAACGGAGACTGGACTCTTATGTGCCCCAATGAGTGCCCTGGTCTTGCCGA 610500
Query 94374 CGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAG 94433
| | || | || || | ||| || | |||||| | |||||||| |
Sbjct 610499 CTGCTACGGTGAGGAGTTCGAGGCCTTATACGAGAAGTACGAACAGATGGGCAAGGGTCG 610440
Query 94434 GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493
||| | | | || ||||| ||| || ||| | || | || ||||| ||
Sbjct 610439 CAAGACTCTTAAGGCCCAAAAGCTCTGGTATGCCATCCTCGAGGCTCAAACCGAGACAGG 610380
Query 94494 TACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGG 94553
| |||| ||| | | |||||| ||| |||| ||| ||||||| || |||| ||
Sbjct 610379 CAACCCCTTCATGCTCTACAAGGATGCTGCCAACCGCAAAAGCAACCAGAAGAACCTGGG 610320
Query 94554 GGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613
||| ||||| || || ||||| ||||| | ||||| | | || |||||| |
Sbjct 610319 TACCATCCGTAGCTCCAACCTCTGCACTGAGATCATTGAGTACTCCGCGCCTGACGAGGT 610260
Query 94614 TGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTC 94673
|||||||||||||||| ||| | | || |||| ||||| || ||||| |
Sbjct 610259 CGCTGTGTGTAACCTGGCCTCGCTTGCCTTGCCCACATTCGT------TGACTACA--AC 610208
Query 94674 TACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATG--GTCTTGAAC 94731
| | || | ||| | || |||| | || | ||| || || |||
Sbjct 610207 GAGGGTGTC-TACGACTTCCAGAAGCTCCACGAGGTCAC--CCAGGTTGTCGTTCGCAAC 610151
Query 94732 CTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTG 94791
|| ||||| | || || ||| |||||| |||| |||||| ||| ||| ||
Sbjct 610150 CTCAACAGAATCATTGATGTCAACCACTACCCGGTCCAGGAGGCCCGCAACAGCAACATG 610091
Query 94792 AAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGT 94851
|| || ||||| || |||| || |||||| | ||||| || | || | ||
Sbjct 610090 CGCCACCGCCCCATTGGTCTCGGTGTGCAGGGTCTTGCGGATGCCTTCTTGGCTCTCCGC 610031
Query 94852 CTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTAT 94911
|||||| ||| ||| || || | | || ||| |||||||| | || ||
Sbjct 610030 ATGCCCTTCGAGTCTCCTGAAGCTCGTGACCTCAACAAGAAGATATTCGAGACAATCTAC 609971
Query 94912 TACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAATCG 94971
| | ||| | | || || || ||||| | ||| | || || || | ||
Sbjct 609970 CATGCTGCCCTTACTATGTCGGTGCAGTTGGCTA---AGGAGGAGGGTCCCTACCAGACG 609914
Query 94972 TTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCC 95031
| | || || || | ||||||||| | |||| |||| | ||| ||| ||||||
Sbjct 609913 TACGAGGGTTCCCCTGTTTCTCAGGGCATTCTCCAGTACGACATGTGGAATGTTAAGCCC 609854
Query 95032 TCGGGTCTGTACGACTGGGAAGCTCT--ACGCGCTGATGTTATCAAACACGGTGTGAAAA 95089
|||| ||| | |||||||| ||||| | | || || | | | |||||||| |
Sbjct 609853 TCGGATCTCTGGGACTGGGACGCTCTGAAGGAGCAGA--TCAAGCAGCACGGTGTCCGCA 609796
Query 95090 ACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACG 95149
|| | ||||| || || |||||||| || ||| ||| | |||||| | |||||||| |
Sbjct 609795 ACTCTCTGCTCGTCGCGCCCATGCCGACTGCCAGCACCTCTCAGATCTTGGGCAACAATG 609736
Query 95150 AGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCC 95209
||| ||||| |||| |||||||||| | ||| | | || || || || || || || |
Sbjct 609735 AGTGCTTCGAGCCCTACACCTCCAACATTTACCAACGTCGTGTCCTTGCTGGCGAGTTTC 609676
Query 95210 CCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGGGTGACAAG 95268
||| ||||| ||| | |||||| | || | ||||| ||||| ||
Sbjct 609675 AAGTCGTCAACCCATGGCTCTTGAAGGACCTCGTCGAC-ATGGGTCTGTGGTCCGATGCT 609617
Query 95269 GTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAG 95328
| ||||||| | | || ||||| || ||||||||||||| | || ||
Sbjct 609616 ATGAAGAACCGTATCATTGCCGAGAACGGTTCTATCCAGAACATCCCCAACATTCCTACC 609557
Query 95329 GACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372
|| | ||||| | |||||||| || ||||| ||| | |||||
Sbjct 609556 GAGGTGAAGGCATTGTACAAGACTGTTTGGGAAATCTCCCAGCG 609513
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494719811146080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |