Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20sublineola_20[genbank_20GCA_5F001951195.1_202017-
01-13] 548 sequences; 64,848,627 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq10 96.9 2e-14
>seq10
Length=843860
Score = 96.9 bits (106), Expect = 2e-14
Identities = 154/221 (70%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| |||||||| || | ||||| || ||| || | || || || | |||||
Sbjct 383977 ACGGAGACGGAGCACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCCGAGAGAGT 383918
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| | ||| ||||| ||||| |||||||| || | ||||| ||||||||||| || ||
Sbjct 383917 GCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAAGCGTTGCTGATCAGGAGGGATGCC 383858
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730
||||||||| |||||||| |||||| || || ||||||| | | || ||
Sbjct 383857 TTCCTTGTCCTGAATCTTAGACTTGACATTGTCGATGGTATCAGAGGACTCAACCTCGAG 383798
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTGGA 480771
|| || || || || || || ||||| |||| ||||||
Sbjct 383797 AGTGATGGTCTTGCCAGTAAGGGTCTTGACGACTGTTTGGA 383757
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268155693621104
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |