Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20sublineola_20[genbank_20GCA_5F001951195.1_202017- 01-13] 548 sequences; 64,848,627 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq10 86.0 1e-11 >seq10 Length=843860 Score = 86.0 bits (94), Expect = 1e-11 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || ||||| ||||| |||||||| | | ||| |||||||| || || || || || Sbjct 384366 TCCTCCAATTGCTTTCCAGCAAAAATGAGACGCTGCTGATCAGGGGGGATGCCCTCCTTG 384307 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| || || | || | ||| ||| || || ||||||||||| || | || || Sbjct 384306 TCTTGGATCTTCGACTTAACATTGTCAATCGTGTCCGAAGACTCAACCTCCAACGTAATT 384247 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || | ||| || || || |||||||| Sbjct 384246 GTCTTTCCAGTCAACGTCTTGACGAAGATTTGCAT 384212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899648237367360