Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001618705.1_202016- 04-12] 1,300 sequences; 52,962,735 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq58 114 3e-20 >seq58 Length=215898 Score = 114 bits (126), Expect = 3e-20 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 230452 GGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTT 230511 ||||||||| | | || ||| |||||||| || || || ||||||||| | || ||| Sbjct 121465 GGCATGAACTCCAACCTGATGAAGCAGTACATTGAGTTTGTTGCCGACCGCCTCTTGGTT 121524 Query 230512 GCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATT 230571 || || || | || || || ||||| ||| |||||||||| || |||||| ||| Sbjct 121525 GCTCTCGGCAATGACAAGGTCTACAAGTCTTCCAACCCCTTTGACTTCATGGAGAACATC 121584 Query 230572 TCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGT 230631 || || || |||||||||||||| || |||||||| ||||| |||| | | ||| Sbjct 121585 TCCCTGGGCGGCAAGACCAACTTCTTTGAGAAGCGTGTTGCCGACTACCAGAAGGCCGGT 121644 Query 230632 GTGATGAA 230639 || ||||| Sbjct 121645 GTCATGAA 121652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057806380619000