Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001618705.1_202016-
04-12] 1,300 sequences; 52,962,735 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq319 499 6e-136
seq58 237 3e-57
>seq319
Length=296375
Score = 499 bits (552), Expect = 6e-136
Identities = 1200/1787 (67%), Gaps = 79/1787 (4%)
Strand=Plus/Minus
Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149
||| || ||||| ||||| || | || || || |||||||||| |||| | || ||
Sbjct 228235 GTTGACAACCTGGAACTCACCAGCAAGAACACGACGCTGGTAGATGTTGGAGGTGTAGGG 228176
Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209
||| | || ||| ||||||||| ||||||| ||||| |||||||||||||||| ||
Sbjct 228175 CTCAAAGCACTCGTTGTTGCCCAAGATCTGCGAGGTGCTGGCAGTCGGCATGGGCGCGAC 228116
Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAG---TC 244266
|| ||| ||| | || |||||| ||| | |||| ||| ||| | ||
Sbjct 228115 GAGAAGAGAGTTGCGGACACCGTGC-------TGCTTAATCTG--CTCCTTCAAAGCATC 228065
Query 244267 CCACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTT 244326
||| | || |||| ||| | | |||| |||||||||| |||| || | ||||
Sbjct 228064 CCA---GTCCCAGAGATCCGAGGGCTTGACATTCCACATGTCATACTGGAGGATGCCCTG 228008
Query 244327 GCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGC 244385
|| ||| |||||||| ||| ||||||| || || || |||||||| || |
Sbjct 228007 AGAAACAGGGGAACCCTCGTACGTCTGGTAGGGGCCCTCCTCCTTGGCCAGCTGCACCGA 227948
Query 244386 TCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCT 244445
| || |||||| |||| ||||||||||||||||||| ||||||| | |||||| ||||
Sbjct 227947 CATGGT-GAGGGCAGCGTGGTAGATGGTCTCGAAGATCTTCTTGTTGAGGTCGCGAGCCT 227889
Query 244446 TGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGA 244505
| | |||||| || | | || |||| | || || || ||||| || ||||
Sbjct 227888 CGGGAGACTCGAAGGGCATACGGAGAGCCAGGAAGGCATCAGCAAGACCCTGGACACCGA 227829
Query 244506 TGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGC 244565
|||||||| | ||| ||| ||||| | || || | || ||||| ||||
Sbjct 227828 GACCGATGGGGCGGTGGCGCATGTTGCTGTTGCGAGCCTCCTGAACAGGGTAGTGGTTGA 227769
Query 244566 CGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAA 244625
||||||| | |||| ||||||||| | | || ||| ||| ||| ||| |
Sbjct 227768 CGTCGATGATTCTGTTCAGGTTGCGGACAACGACCTGGGTGACCTCGTGGAGCTTCTGGA 227709
Query 244626 AGTCGTA--CTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGAC 244683
||||||| ||| ||||| | | || | ||||| | |||||||
Sbjct 227708 AGTCGTAGACTC--------CCTCGTTG-TAGTCA-----ACAAAGGTGGGCAGGGCGAG 227663
Query 244684 GCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCA 244743
||||||||||||||| || ||||| || | | ||||| || |||||| |||||
Sbjct 227662 CGAGGCCAGGTTGCAGACAGCGACCTCATCAGGCGCGCAGTACTCGATAATCTCCGTGCA 227603
Query 244744 GAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTC 244803
|||||| || ||| ||||| |||| || || ||| |||| |||| ||| ||
Sbjct 227602 GAGGTTGGAGCTGCGGATAGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGGCGGCATC 227543
Query 244804 CTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAG 244863
|||||||||||||||||| || |||||| |||||| |||||| | | ||||||
Sbjct 227542 CTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCGAGGATGGCATACCAGAG 227483
Query 244864 GTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCC-TCTGCCTCGTAGCGGGTGTACAGGG 244922
| | |||||| | ||| ||||| |||||||| ||||| ||||| ||||| ||
Sbjct 227482 CTTCTGAGCCTTCATGGTCTTGCGACCCTTGCCCATCTGC-TCGTACTTCTCGTACAAGG 227424
Query 244923 CCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCA--CGACGCCGGGCACATGAG 244980
|||| ||||| ||| || ||| | ||||| ||||| || | |||||||||||
Sbjct 227423 CCTCAAACTCCTCGCCGTAGCAGTCGGCCAGGCCAGGGCATTCGTTG--GGGCACATGAG 227366
Query 244981 ACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTG 245040
| |||| || || | || ||||||| ||||||||||||||| ||||||||||| |
Sbjct 227365 AGTCCAGTCCCCATTCTTCTCCACCCTCTTCATGAAGAGGTCGGGAATCCAGAGGGCGAG 227306
Query 245041 GAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTC 245100
||| ||||| | || | ||| ||| ||| |||||| | || ||||| |||||
Sbjct 227305 GAAAAGGTCACGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGCAAATCCAAGAAGTC 227246
Query 245101 AAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCC 245160
||||| ||| ||||||| ||||| | ||| | |||| || ||||| |||||||||||
Sbjct 227245 GAAGACATCGGCGTGCCAAGGCTCAAGGTAAATGGCGAAAGCACCGGGGCGCTTGTTGCC 227186
Query 245161 TCCCTGGTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGC 245216
|||||||| | | | ||||| |||||||| || || |||| || | |
Sbjct 227185 ACCCTGGTCGA----CGTAGCGAGCAGTGTTGTTGAAGACACGGAGCATAGGGACGACAC 227130
Query 245217 CGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGG 245276
|||| ||| ||||| ||||| || || | ||| || | | || ||| | |||
Sbjct 227129 CGTTGGAGGTACCGTTCGTGCCGGCAATATATGAGCCGGTGGC---GCGGATGC-GGTGG 227074
Query 245277 AC----ATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCT 245332
|| | || | || ||||| ||||||||| | |||||| |||||| ||||||
Sbjct 227073 ACGTTGAGACCAATGCCACCGGCCATCTTGGAGATCATGGCGCAAGTCTTGAGGGTGTCA 227014
Query 245333 GCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGC 245392
|| ||||| || |||| |||||||| || || ||||| ||||||||||||| |
Sbjct 227013 TAGATACCCTCAATAGAGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGACAGCTGGGCC 226954
Query 245393 TTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGG 245452
| ||| | | | |||||| || ||||| |||||| || ||| | |||||| |
Sbjct 226953 TGAGGGGTACCGGCGTTGAAGAGTGTGGGAGAGGCGTGAGTGAAGAACTTGCTCGACATC 226894
Query 245453 AACCCGTACGTCTGGA-GCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCT 245511
| ||| || | || | | || || | || ||| || ||| | |||| |
Sbjct 226893 AGGTTGTAGGTTTCGATGACGCGC-TCAACGTCGTCACCCCAGATACCAACGGCGACACG 226835
Query 245512 CATGAGGGTGTGCTGGGGCGTCTCG---ATGGGTCCCTCGGGTCCCTTGAGCATGTAGGA 245568
||||| |||||||||| ||||| || || || | |||||| | ||| ||
Sbjct 226834 CATGATCATGTGCTGGGGTCTCTCGGCAATCTTGCCGTCAAG---CTTGAGGAGGTATGA 226778
Query 245569 GCGCTCGAGCGTCTTGAACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGC 245628
| ||| | |||||||| || ||||| |||| |||||| || | || |||
Sbjct 226777 TCTCTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCGCGGTCATAGACGATGGC 226718
Query 245629 TGCGTCGAGTCTC-TCGGCGTGCTTC-TGACTGACCTCGTA--AAACTTTTGCGCT-ATG 245683
| ||| || ||| || |||| || |||| | | ||||| | ||||| | |||
Sbjct 226717 AGAGTCAAG-CTCATCCTTGTGCCTCATGACAG-CGTCGTATGTGTCCTTTGCAATCATG 226660
Query 245684 AGGGGAGCCCTGAGCCCGGTGTCCGGATTGACGTTGAACCAGAGCCTCTTGCACACCTCC 245743
| | ||| || ||| | | || ||||||| | |||| | || || ||
Sbjct 226659 GGAGACGCCTTG---CCGTTCTTGGGGTTGACGTAGTGGTAGAG---GTCGCTGACAACC 226606
Query 245744 GAGAAC--TTGGGGC-TGGTGAGCTTATGCAGGTTGGTGACTGCTATGCGCGCCGCCAAC 245800
|| || ||| | |||| |||| || ||||||| |||||| || || || ||||
Sbjct 226605 GAAGACCATTGCTTCTTGGTTTGCTTGTGGAGGTTGGAGACTGCGATACGAGCAGCCAGG 226546
Query 245801 TTGCTGTAGTCGGGGTGAGTGGTGGTCATGTTGGAGGCCGTGTGGGC 245847
|| |||||||||||| ||| |||||||| || || || | |||
Sbjct 226545 ATGGCGTAGTCGGGGTGGGTGACGGTCATGTAGGCAGCAGTTTCGGC 226499
>seq58
Length=215898
Score = 237 bits (262), Expect = 3e-57
Identities = 373/524 (71%), Gaps = 25/524 (5%)
Strand=Plus/Plus
Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACG-CAAC 42691
||||||||| |||||||| |||||||| || || ||||| || | || | | |
Sbjct 121126 CCCTGCATCCGCAAGAAGGCCGACTGGGCCCTGAAGTGGATT-AGCGATGAGAAGTCCTC 121184
Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751
|||| | || | || || ||||| ||||||| ||||| ||||||||| || |||||
Sbjct 121185 CTTCGCCCAGCGTCTCGTTGCCTTCGCCGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTT 121244
Query 42752 CGCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACG 42810
|||||||||||||||||||||| || ||| | |||||||| || |||||||| ||||
Sbjct 121245 CGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCT-TATGCCCGGTCTGACCTTCTCCAACG 121303
Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870
| || ||| | || ||||| || || | ||||| ||||||||||| | ||| |
Sbjct 121304 AGCTGATCTCTCGTGATGAGGGTCTTCACACCGACTTCGCCTGCCTCCTCTACTC---TC 121360
Query 42871 ACCTCAGGCACAAGCCCTCGAAGGAGCGGGTC---CGGGCCATCATCACGGAGGCCGTGG 42927
|||||| | || |||| | | ||| |||| || ||||||| || || ||
Sbjct 121361 ACCTCAAGAAC-CGCCCCAGCA--AGCAGGTCATTGAGGACATCATCGTCGATGCTGTCA 121417
Query 42928 AGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACG 42987
|||| ||| |||||||||| || || | ||||| | ||| ||||||||||| |
Sbjct 121418 AGATTGAGCAGGAGTTCCTGACCGAGGCTCTGCCTTGCGCTCTGCTCGGCATGAACTCCA 121477
Query 42988 ACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCA 43047
|||| ||| ||||||| ||| || ||||||| ||| | | | | ||||
Sbjct 121478 ACCTGATGAAGCAGTACATTGAGTTTGTTGCCGACCGCCTCTT------GGTTGCTCTCG 121531
Query 43048 GC--CGCC----TCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGG 43101
|| | | ||||||| | | |||||| ||||| |||||||||||||| |||
Sbjct 121532 GCAATGACAAGGTCTACAAGTCTTCCAACCCCTTTGACTTCATGGAGAACATCTCCCTGG 121591
Query 43102 AGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145
|||||||||||||| || |||||||| || ||||||||||||
Sbjct 121592 GCGGCAAGACCAACTTCTTTGAGAAGCGTGTTGCCGACTACCAG 121635
Score = 141 bits (156), Expect = 2e-28
Identities = 236/337 (70%), Gaps = 13/337 (4%)
Strand=Plus/Plus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||||| || ||| |||||||||||||||||||||||||
Sbjct 120730 ATCTGGCAGATGTACAAGAAGGCTGAGGCCTCTTTCTGGACCGCCGAGGAGATTGACCTG 120789
Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTG---TCT--GAGAACGAAAAGTTTTTCCTCA 42414
||||||| || |||| | || | || ||| | || |||| ||| ||
Sbjct 120790 TCCAAGGATCTCCACGACTGGAA--CAATAAGATCAACGAGGATGAGAAGTACTTCATCT 120847
Query 42415 AAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCA 42474
|||| || |||||||||||||| ||||||||||| |||||||||||| ||| |
Sbjct 120848 CGCACATCCTCGCCTTCTTCGCCGCTTCTGACGGCATTGTCAATGAGAACTTGGTCGAGC 120907
Query 42475 GGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCA 42534
| |||| ||||| ||| | ||||| || |||||||| |||||||| || |
Sbjct 120908 GCTTCAGCGGCGAGGTCCAGGTCCCCGAGGCCCGTTGCTTCTATGGCTTCCAAATCATGA 120967
Query 42535 TAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATC 42591
| |||||| | ||||| ||| ||| | ||||||| |||| |||||| ||| |
Sbjct 120968 TGGAGAACATCCACTCCGAGACCTACTC---GCTGCTCATCGACACCTACATCAAGGAGC 121024
Query 42592 CCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGAC 42628
| | | |||| | || ||||| ||||| || ||
Sbjct 121025 CTGCCCAGCGCACGTACCTCTTCAACGCCATTGACAC 121061
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944323854488000
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