Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001618705.1_202016- 04-12] 1,300 sequences; 52,962,735 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq319 86.0 5e-12 >seq319 Length=296375 Score = 86.0 bits (94), Expect = 5e-12 Identities = 150/218 (69%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 130763 TGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGAT 130822 || || |||||||| || || || | ||| |||||| ||| | || |||||| | Sbjct 228225 TGGAACTCACCAGCAAGAACACGACGCTGGTAGATGTTGGAGGTGTAGGGCTCAAAGCAC 228166 Query 130823 TCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGAA 130882 ||||||||||| || || || | || | || || |||||| || || | ||||| Sbjct 228165 TCGTTGTTGCCCAAGATCTGCGAGGTGCTGGCAGTCGGCATGGGCGCGACGAGAAGAGAG 228106 Query 130883 TTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGAGGTA 130942 || || | ||||||| | | || | |||||| ||||||| ||||| ||| | Sbjct 228105 TTGCGGACACCGTGCTGCTTAATCTGCTCCTTCAAAGCATCCCAGTCCCAGAGATCCGAG 228046 Query 130943 GGTTTGACATTGTTCCACATATCAAATTGTAGTATGCC 130980 || |||||| |||||||| ||| | || || ||||| Sbjct 228045 GGCTTGACA---TTCCACATGTCATACTGGAGGATGCC 228011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424927667445600