Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001618715.1_202016-
04-12] 791 sequences; 52,719,552 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq459 271 9e-68
>seq459
Length=266450
Score = 271 bits (300), Expect = 9e-68
Identities = 1173/1834 (64%), Gaps = 47/1834 (3%)
Strand=Plus/Minus
Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624
||||||||||||| || |||| | || ||||||||||| |||||||| || |
Sbjct 93439 TGAACTGAATGGGAGCAGCAGCAGCCTGCGTGCGCAGGTAGTACATGCCCGTCTTCAGGC 93380
Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 113684
| |||||||| | | |||||| || | |||| | || || | ||||
Sbjct 93379 CGAGCTTCCAGCCGGCGAAATGCATGCTGGTTATCTTGCCCATGGTCGGGTCCTTCATGT 93320
Query 113685 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCA 113744
| ||| | || || || ||||||||| ||||| || || ||||| | | |
Sbjct 93319 GAATGTTGAGCGACTGCGACTGGTCGATGAAGGCACCACGGTCGGCAGCCATCTGCACAA 93260
Query 113745 CATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATAT 113804
|| | | ||| ||||| ||||| |||| ||| ||| | ||| || || |
Sbjct 93259 CAGTACGCTGCGAGATCTCCCAAACAGTCTTGTACAGGGCCTTGACCTCAGTAGGAATGT 93200
Query 113805 CCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGA---GATCCTTCATATCCTTTG 113861
||| || |||||||| ||| || | | |||| | | |||||| | | |
Sbjct 93199 TGGGGATGTTCTGGATGGA---ACCGTTCTCGGCAATGATGCGGTTCTTCATGGCATCGG 93143
Query 113862 ACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCAC 113921
|||| ||||| || | |||||||| || ||| |||||||| |||||||
Sbjct 93142 ACCACAGACCCATGTCGACGAGATCCTTCAAGAGCCAAGGGTTGACAACCTGGAACTCAC 93083
Query 113922 CCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTAC 113981
| || || || | | | ||||| |||| ||||| |||||||||||||| ||||| |
Sbjct 93082 CAGCAAGAACACGACGCTGGTAGATGTTGGAGGTGTAGGGCTCAAAGCACTCGTTGTTGC 93023
Query 113982 CCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGAC 114041
||||||| || | |||| ||| || |||||||| || | |||||| ||| |||| ||
Sbjct 93022 CCAAGATCTGCGAGGTGCTGGCAGTCGGCATGGGCGCGACGAGAAGAGAGTTGCGGACAC 92963
Query 114042 CCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCT 114101
| | | | |||| | ||||| | || |||||||| || | | || | |
Sbjct 92962 CGTGCTGCTTAATCTGCTCCTTCAAAGCATCCCAGTCCCAGAGATCCGAGGGCTTGACAT 92903
Query 114102 GCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATG 114161
|||||| ||| |||||||||| || || || | || || ||||| | |||| ||| |
Sbjct 92902 TCCACATGTCATACTGGAGGATGCCCTGAGAAACAGGGGAACCCTCGTACGTCTGGTAGG 92843
Query 114162 GGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCT 114218
||||||| ||| |||| | | || | | |||||| ||||| || || ||||
Sbjct 92842 GGCCCTCCTCCTTGGCCAGCTGCACCGACATGG---TGAGGGCAGCGTGGTAGATGGTCT 92786
Query 114219 CAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAA 114278
| || || || | | |||||| || || || | | ||| |
Sbjct 92785 CGAAGATCTTCTTGTTGAGGTCGCGAGCCTCGGGAGACTCGAAGGGCATACGGAGAGCCA 92726
Query 114279 TAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACT 114338
|| |||| || ||||| ||||||||||| || || ||||| || | ||| || |
Sbjct 92725 GGAAGGCATCAGCAAGACCCTGGACACCGAGACCGATGGGGCGGTGGCGCATGTTGCTGT 92666
Query 114339 TTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGA 114398
| ||||| || || || || || ||||| | || || || || | |
Sbjct 92665 TGCGAGCCTCCTGAACAGGGTAGTGGTTGACGTCGATGATTCTGTTCAGGTTGCGGACAA 92606
Query 114399 CAACCTTTGTGATTTCATGAAGCTTTTCGTAATC-AAAACTGCGAGTCTCTTCATTG--- 114454
| |||| |||| || || ||||| | | | || | ||| | ||| | | |
Sbjct 92605 CGACCTGGGTGACCTCGTGGAGCTTCTGGAAGTCGTAGACTCC----CTCGTTGTAGTCA 92550
Query 114455 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 114514
||| | | || ||||||| || ||||| || || |||| | |||||| | |
Sbjct 92549 ACAAAGGTGGGCAGGGCGAGCGAGGCCAGGTTGCAGACAGCGACCTCATCAGGCGCGCAG 92490
Query 114515 TACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 114574
||||| ||||| ||||| || | || || || || ||||| | |||||| || ||
Sbjct 92489 TACTCGATAATCTCCGTGCAGAGGTTGGAGCTGCGGATAGTGCCAAGGTTCTTCTGGTTG 92430
Query 114575 GACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGAC 114634
||| ||| ||||||||||| |||||| | || | || ||||| || |||| |
Sbjct 92429 CTCTTGCGGTTGGCGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCC 92370
Query 114635 TTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTG----GCTCGCCCCT 114689
| ||| || || | ||||| | || | | || || ||| ||| || |||| |
Sbjct 92369 TCGAGGATGGCATACCAGAGCTTCTGAGCCT-TCA---TGGTCTTGCGACCCTTGCCCAT 92314
Query 114690 CCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTG 114749
|| ||||||||| ||| | ||| |||||||| || || | || | || || |
Sbjct 92313 -CTGCTCGTACTTCTCGTACAAGGCCTCAAACTCCTCGCCGTAGCAGTCGGCCAGGCCAG 92255
Query 114750 GTGCCTT-ATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAG 114808
| || || | ||||| | ||||| ||| | ||| || ||| || | ||||||||||
Sbjct 92254 G-GCATTCGTTGGGGCACATGAGAGTCCAGTCCCCATTCTTCTCCACCCTCTTCATGAAG 92196
Query 114809 AGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGA 114868
||||| || |||||||| || ||| || || || |||| | || || | || ||
Sbjct 92195 AGGTCGGGAATCCAGAGGGCGAGGAAAAGGTCACGGGCGCGAACCTCCTCCTTGCCGTGG 92136
Query 114869 TTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCG 114928
|| ||||| ||||| ||||| | || ||| |||||||| || || ||||| | |||
Sbjct 92135 TTCTTGCGCAAATCCAAGAAGTCGAAGACATCGGCGTGCCAAGGCTCAAGGTAAATGGCG 92076
Query 114929 ATTG-AC-----CCCTTACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAAT 114982
| | || | ||| | | ||| |||||| || || | || ||| || ||
Sbjct 92075 AAAGCACCGGGGCGCTT--GTTG-CCACCCTGGTCGACGTAGCGAGCAGTGTTGTTGAAG 92019
Query 114983 ACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTA 115042
|| || ||||| || | || ||| | || || || || || |||| ||
Sbjct 92018 ACACGGAGCATAGGGACGACACCGTTGGAGGTACCGTTCGTGCCGGCAATATATGAGCCG 91959
Query 115043 TTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCG 115102
|||| | || |||| || | |||||| || || ||| ||| ||||| |||
Sbjct 91958 GTGGCGCGGATGCGGTGGACGTTGAGACCAATGCCACCGGCCATCTTGGAGATCATGGCG 91899
Query 115103 CACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAG 115162
|| | |||| || | ||||| || || || ||||| |||| | ||| ||||||
Sbjct 91898 CAAGTCTTGAGGGTGTCATAGATACCCTCAATAGAGTCCTCCTTCATGTCGACGAGGAAG 91839
Query 115163 CAGCTCGACATTTGTGGCCT-TGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGAT 115221
|| |||| || ||||| || ||||| ||||||||||| || || | ||||| |
Sbjct 91838 CAAGAGGACAGCTG-GGCCTGAGGGGTACCGGCGTTGAAGAGTGTGGGAGAGGCGTGAGT 91780
Query 115222 GAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCG 115279
|| | | |||| |||||| | |||||| || | |||| || ||| || ||
Sbjct 91779 GA--AGAACTTGCTCGACATCAGGTTGTAGGTTTCGATGACGCGCTCAACGTCGTCACCC 91722
Query 115280 TGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCG 115339
||||| | | ||| ||||| | ||||| |||||| | || | | || ||
Sbjct 91721 CAGATACCAACGGCGACACGCATGATCATGTGCTGGGGTCTCTCGGCAATCTTGCCGTCA 91662
Query 115340 AGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGA 115373
||| | ||||||| ||||||| |||||||
Sbjct 91661 AGCTTGAGGAGGTATGATCTCTCCAAAGTCTTGA 91628
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597347693666280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |