Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001618715.1_202016- 04-12] 791 sequences; 52,719,552 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq459 383 2e-101 >seq459 Length=266450 Score = 383 bits (424), Expect = 2e-101 Identities = 1097/1672 (66%), Gaps = 40/1672 (2%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||| | |||||| ||| |||||| || |||||||||||| | || ||| Sbjct 91609 AACTACCAATACTTCGGCTTCAAGACTTTGGAGAGATCATACCTCCTCAAGCTTGACGGC 91668 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | | || ||||| |||| || || || | ||||| |||||| | || || || || Sbjct 91669 AAGATTGCCGAGAGACCCCAGCACATGATCATGCGTGTCGCCGTTGGTATCTGGGGTGAC 91728 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894 ||| | | || | | | || ||| | |||| | || ||| Sbjct 91729 GACGTTGAGCGCGTCATCGAAACCTACAACCTGATGTCGAGCAAGTTCTTCACTCACGCC 91788 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953 | || || || |||||||| || ||||| | | ||| |||| || || ||||| | Sbjct 91789 TCTCCCACACTCTTCAACGCCGGTACCCCTCAGGCCCAGCTGTCCTCTTGCTTCCTCGTC 91848 Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013 ||| | |||| ||||| || || || | |||| ||||||| || || | || Sbjct 91849 GAC-ATGAAGGAGGACTCTATTGAGGGTATCTATGACACCCTCAAGACTTGCGCCATGAT 91907 Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073 ||| || || || || || || ||| |||||| | | || |||| || || || Sbjct 91908 CTCCAAGATGGCCGGTGGCATTGGTCTCAACGTCCACCGCATCCGCGCCACCGGCTCATA 91967 Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133 || ||| || || || ||||||||||| |||||||||||||||| ||||||||||| Sbjct 91968 TATTGCCGGCACGAACGGTACCTCCAACGGTGTCGTCCCTATGCTCCGTGTCTTCAACAA 92027 Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193 | | || |||||||| ||||||||||| | | | ||| ||||||| | || || Sbjct 92028 CACTGCTCGCTACGTCGACCAGGGTGGCAACAAGCGCCCCGGTGCTTTCGCCATTTACCT 92087 Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253 ||||| |||||||| || || | ||| | || |||| |||||||||||||| || Sbjct 92088 TGAGCCTTGGCACGCCGATGTCTTCGACTTCTTGGATTTGCGCAAGAACCACGGCAAGGA 92147 Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313 || | ||| | ||||| ||| ||| |||||| | || ||||| || ||||| | Sbjct 92148 GGAGGTTCGCGCCCGTGACCTTTTCCTCGCCCTCTGGATTCCCGACCTCTTCATGAAGAG 92207 Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373 || ||||| || | ||||| ||| | || ||||| ||||| || || ||| |||| Sbjct 92208 GGTGGAGAAGAATGGGGACTGGACTCTCATGTGCCCCAACGAATGCCCTGGCCTGGCCGA 92267 Query 94374 CGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAG 94433 | | || | ||||| | |||||| | ||||| | |||||||| | Sbjct 92268 CTGCTACGGCGAGGAGTTTGAGGCCTTGTACGAGAAGTACGAGCAGATGGGCAAGGGTCG 92327 Query 94434 GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493 ||| ||| | ||| |||||| ||| || ||| | || | ||| ||||| || Sbjct 92328 CAAGACCATGAAGGCTCAGAAGCTCTGGTATGCCATCCTCGAGGCCCAGACCGAGACTGG 92387 Query 94494 TACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGG 94553 || |||| ||| | | |||||| | | |||| |||| ||||||| || |||| || Sbjct 92388 TAACCCCTTCATGCTCTACAAGGATGCCGCCAACCGCAAGAGCAACCAGAAGAACCTTGG 92447 Query 94554 GGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613 ||| ||||| || || ||||| |||||| ||||||| | || || ||| | Sbjct 92448 CACTATCCGCAGCTCCAACCTCTGCACGGAGATTATCGAGTACTGCGCGCCTGATGAGGT 92507 Query 94614 TGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTC 94673 ||||| || ||||||| ||| || |||| |||| || || || ||||| | Sbjct 92508 CGCTGTCTGCAACCTGGCCTCGCTCGCCCTGCCCACCTTTGT------TGACTACA--AC 92559 Query 94674 TACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTC-TTG---- 94728 | | || | ||| | || |||| | || || | |||| ||| Sbjct 92560 GAGGGAGTC-TACGACTTCCAGAAGCT------CCACGAGGTCACCCAGGTCGTTGTCCG 92612 Query 94729 -AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAA 94787 ||||||||||| | |||||| ||| |||||| || | |||||| ||| || Sbjct 92613 CAACCTGAACAGAATCATCGACGTCAACCACTACCCTGTTCAGGAGGCTCGCAACAGCAA 92672 Query 94788 CCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGAT 94847 | || || || |||||||| |||| ||||||||| | || || || | || | Sbjct 92673 CATGCGCCACCGCCCCATCGGTCTCGGTGTCCAGGGTCTTGCTGATGCCTTCCTGGCTCT 92732 Query 94848 GCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCAT 94907 ||| |||||| ||| ||| ||| || | | || ||| || ||||| | ||| Sbjct 92733 CCGTATGCCCTTCGAGTCTCCCGAGGCTCGCGACCTCAACAAGAAGATCTTCGAGACCAT 92792 Query 94908 TTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCAC-ACG 94966 || ||| ||| | | || || || |||||| ||| || ||||| | || Sbjct 92793 CTACCACGCTGCCCTCACCATGTCGGTGCAGCTGGCCA---AGGA-GGAGGGCCCCTACC 92848 Query 94967 AATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGA 95026 | ||| | || || || | |||||||| | |||| ||| | ||| ||| | Sbjct 92849 AGACGTACGAGGGTTCCCCTGTTTCTCAGGGCATCCTCCAGTATGACATGTGGAATGTCA 92908 Query 95027 AGCCCTCGGGTCTGTACGACTGGGAAGCTCT--ACGCGCTGATGTTATCAAACACGGTGT 95084 ||||||||| ||| | |||||||| ||| | | | || || ||| | |||||||| Sbjct 92909 AGCCCTCGGATCTCTGGGACTGGGATGCTTTGAAGGAGCAGA--TTAAGCAGCACGGTGT 92966 Query 95085 GAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAA 95144 ||| | || || || || |||||||| || ||| ||| |||||||| | ||||| Sbjct 92967 CCGCAACTCTCTTCTCGTCGCGCCCATGCCGACTGCCAGCACCTCGCAGATCTTGGGCAA 93026 Query 95145 CAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGA 95204 |||||||| || || |||| |||||||||| | ||| | | || || || || || || Sbjct 93027 CAACGAGTGCTTTGAGCCCTACACCTCCAACATCTACCAGCGTCGTGTTCTTGCTGGTGA 93086 Query 95205 ATTCCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGG---G 95260 |||| || ||||| ||| | ||| || | || | ||||| ||||| | Sbjct 93087 GTTCCAGGTTGTCAACCCTTGGCTCTTGAAGGATCTCGTCGAC-ATGGGTCTGTGGTCCG 93145 Query 95261 GTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAA 95320 || || | ||||||| | | || ||||| ||| ||||||||||||| | | Sbjct 93146 ATGCCA---TGAAGAACCGCATCATTGCCGAGAACGGTTCCATCCAGAACATCCCCAACA 93202 Query 95321 TACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372 | || || ||||||| || |||||||| || ||||||||| ||||||| Sbjct 93203 TTCCTACTGAGGTCAAGGCCCTGTACAAGACTGTTTGGGAGATCTCGCAGCG 93254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494718308424360