Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001618715.1_202016-
04-12] 791 sequences; 52,719,552 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq459 383 2e-101
>seq459
Length=266450
Score = 383 bits (424), Expect = 2e-101
Identities = 1097/1672 (66%), Gaps = 40/1672 (2%)
Strand=Plus/Plus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||| | |||||| ||| |||||| || |||||||||||| | || |||
Sbjct 91609 AACTACCAATACTTCGGCTTCAAGACTTTGGAGAGATCATACCTCCTCAAGCTTGACGGC 91668
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| | || ||||| |||| || || || | ||||| |||||| | || || || ||
Sbjct 91669 AAGATTGCCGAGAGACCCCAGCACATGATCATGCGTGTCGCCGTTGGTATCTGGGGTGAC 91728
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894
||| | | || | | | || ||| | |||| | || |||
Sbjct 91729 GACGTTGAGCGCGTCATCGAAACCTACAACCTGATGTCGAGCAAGTTCTTCACTCACGCC 91788
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953
| || || || |||||||| || ||||| | | ||| |||| || || ||||| |
Sbjct 91789 TCTCCCACACTCTTCAACGCCGGTACCCCTCAGGCCCAGCTGTCCTCTTGCTTCCTCGTC 91848
Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013
||| | |||| ||||| || || || | |||| ||||||| || || | ||
Sbjct 91849 GAC-ATGAAGGAGGACTCTATTGAGGGTATCTATGACACCCTCAAGACTTGCGCCATGAT 91907
Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073
||| || || || || || || ||| |||||| | | || |||| || || ||
Sbjct 91908 CTCCAAGATGGCCGGTGGCATTGGTCTCAACGTCCACCGCATCCGCGCCACCGGCTCATA 91967
Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133
|| ||| || || || ||||||||||| |||||||||||||||| |||||||||||
Sbjct 91968 TATTGCCGGCACGAACGGTACCTCCAACGGTGTCGTCCCTATGCTCCGTGTCTTCAACAA 92027
Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193
| | || |||||||| ||||||||||| | | | ||| ||||||| | || ||
Sbjct 92028 CACTGCTCGCTACGTCGACCAGGGTGGCAACAAGCGCCCCGGTGCTTTCGCCATTTACCT 92087
Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253
||||| |||||||| || || | ||| | || |||| |||||||||||||| ||
Sbjct 92088 TGAGCCTTGGCACGCCGATGTCTTCGACTTCTTGGATTTGCGCAAGAACCACGGCAAGGA 92147
Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313
|| | ||| | ||||| ||| ||| |||||| | || ||||| || ||||| |
Sbjct 92148 GGAGGTTCGCGCCCGTGACCTTTTCCTCGCCCTCTGGATTCCCGACCTCTTCATGAAGAG 92207
Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373
|| ||||| || | ||||| ||| | || ||||| ||||| || || ||| ||||
Sbjct 92208 GGTGGAGAAGAATGGGGACTGGACTCTCATGTGCCCCAACGAATGCCCTGGCCTGGCCGA 92267
Query 94374 CGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAG 94433
| | || | ||||| | |||||| | ||||| | |||||||| |
Sbjct 92268 CTGCTACGGCGAGGAGTTTGAGGCCTTGTACGAGAAGTACGAGCAGATGGGCAAGGGTCG 92327
Query 94434 GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493
||| ||| | ||| |||||| ||| || ||| | || | ||| ||||| ||
Sbjct 92328 CAAGACCATGAAGGCTCAGAAGCTCTGGTATGCCATCCTCGAGGCCCAGACCGAGACTGG 92387
Query 94494 TACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGG 94553
|| |||| ||| | | |||||| | | |||| |||| ||||||| || |||| ||
Sbjct 92388 TAACCCCTTCATGCTCTACAAGGATGCCGCCAACCGCAAGAGCAACCAGAAGAACCTTGG 92447
Query 94554 GGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613
||| ||||| || || ||||| |||||| ||||||| | || || ||| |
Sbjct 92448 CACTATCCGCAGCTCCAACCTCTGCACGGAGATTATCGAGTACTGCGCGCCTGATGAGGT 92507
Query 94614 TGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTC 94673
||||| || ||||||| ||| || |||| |||| || || || ||||| |
Sbjct 92508 CGCTGTCTGCAACCTGGCCTCGCTCGCCCTGCCCACCTTTGT------TGACTACA--AC 92559
Query 94674 TACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTC-TTG---- 94728
| | || | ||| | || |||| | || || | |||| |||
Sbjct 92560 GAGGGAGTC-TACGACTTCCAGAAGCT------CCACGAGGTCACCCAGGTCGTTGTCCG 92612
Query 94729 -AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAA 94787
||||||||||| | |||||| ||| |||||| || | |||||| ||| ||
Sbjct 92613 CAACCTGAACAGAATCATCGACGTCAACCACTACCCTGTTCAGGAGGCTCGCAACAGCAA 92672
Query 94788 CCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGAT 94847
| || || || |||||||| |||| ||||||||| | || || || | || |
Sbjct 92673 CATGCGCCACCGCCCCATCGGTCTCGGTGTCCAGGGTCTTGCTGATGCCTTCCTGGCTCT 92732
Query 94848 GCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCAT 94907
||| |||||| ||| ||| ||| || | | || ||| || ||||| | |||
Sbjct 92733 CCGTATGCCCTTCGAGTCTCCCGAGGCTCGCGACCTCAACAAGAAGATCTTCGAGACCAT 92792
Query 94908 TTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCAC-ACG 94966
|| ||| ||| | | || || || |||||| ||| || ||||| | ||
Sbjct 92793 CTACCACGCTGCCCTCACCATGTCGGTGCAGCTGGCCA---AGGA-GGAGGGCCCCTACC 92848
Query 94967 AATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGA 95026
| ||| | || || || | |||||||| | |||| ||| | ||| ||| |
Sbjct 92849 AGACGTACGAGGGTTCCCCTGTTTCTCAGGGCATCCTCCAGTATGACATGTGGAATGTCA 92908
Query 95027 AGCCCTCGGGTCTGTACGACTGGGAAGCTCT--ACGCGCTGATGTTATCAAACACGGTGT 95084
||||||||| ||| | |||||||| ||| | | | || || ||| | ||||||||
Sbjct 92909 AGCCCTCGGATCTCTGGGACTGGGATGCTTTGAAGGAGCAGA--TTAAGCAGCACGGTGT 92966
Query 95085 GAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAA 95144
||| | || || || || |||||||| || ||| ||| |||||||| | |||||
Sbjct 92967 CCGCAACTCTCTTCTCGTCGCGCCCATGCCGACTGCCAGCACCTCGCAGATCTTGGGCAA 93026
Query 95145 CAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGA 95204
|||||||| || || |||| |||||||||| | ||| | | || || || || || ||
Sbjct 93027 CAACGAGTGCTTTGAGCCCTACACCTCCAACATCTACCAGCGTCGTGTTCTTGCTGGTGA 93086
Query 95205 ATTCCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGG---G 95260
|||| || ||||| ||| | ||| || | || | ||||| ||||| |
Sbjct 93087 GTTCCAGGTTGTCAACCCTTGGCTCTTGAAGGATCTCGTCGAC-ATGGGTCTGTGGTCCG 93145
Query 95261 GTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAA 95320
|| || | ||||||| | | || ||||| ||| ||||||||||||| | |
Sbjct 93146 ATGCCA---TGAAGAACCGCATCATTGCCGAGAACGGTTCCATCCAGAACATCCCCAACA 93202
Query 95321 TACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372
| || || ||||||| || |||||||| || ||||||||| |||||||
Sbjct 93203 TTCCTACTGAGGTCAAGGCCCTGTACAAGACTGTTTGGGAGATCTCGCAGCG 93254
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494718308424360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |