Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001618715.1_202016-
04-12] 791 sequences; 52,719,552 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq223 84.2 3e-11
>seq223
Length=337804
Score = 84.2 bits (92), Expect = 3e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | || || ||||||||||| || |||||| |||| ||||| |||
Sbjct 245749 ATGCAAATTTTCGTCAAGACCTTGACTGGAAAGACGATTACACTAGAGGTCGAGTCTTCG 245690
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| ||||| || || || || || || || ||||| ||||| || ||
Sbjct 245689 GACACGATTGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCTCCCGACCAG 245630
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| | | || | ||| ||||||||| | || ||| | | || || ||||| ||
Sbjct 245629 CAGCGTCTTATCTTTGCTGGTAAGCAGTTGGAGGATGGCCGCACCTTGAGTGATTACAAC 245570
Query 156003 ATATCCAAAGAGGCGACGCTTCAT 156026
|| || ||| |||||||||||
Sbjct 245569 ATCCAGAAGGAGTCGACGCTTCAT 245546
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731864763615600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |