Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001618715.1_202016-
04-12] 791 sequences; 52,719,552 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq223 102 6e-17
>seq223
Length=337804
Score = 102 bits (112), Expect = 6e-17
Identities = 140/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
|||||||||||| || || ||||| || || |||||||| ||||| | | ||| ||
Sbjct 245990 ACGCAGCACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCGGACAGGGTCCGTCC 246049
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
|| || || || ||||| || | ||||| | ||||| || || ||||| ||||| ||
Sbjct 246050 GTCCTCAAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCAGGGGGAATGCCCTCCTT 246109
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
||| || ||| |||| |||||| | || | || |||||| || || ||||| || |
Sbjct 246110 GTCCTG-AATCTTTGACTTGACATTGTCGATGGTATCAGAAGACTCAACCTCAAGGGTGA 246168
Query 29750 TAGTTTTGCCAGT 29762
| || ||||| ||
Sbjct 246169 TGGTCTTGCCGGT 246181
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385215486366531
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |