Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001618715.1_202016-
04-12] 791 sequences; 52,719,552 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq576 86.0 9e-12
>seq576
Length=178989
Score = 86.0 bits (94), Expect = 9e-12
Identities = 148/213 (69%), Gaps = 9/213 (4%)
Strand=Plus/Minus
Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675
|||||||||||| || || |||||||| | | || | ||||| || || || ||
Sbjct 150940 GCAGGCGAAGTCGGTGTGAAGACCCTCATCACGAGAGATCAGCTCGTTGGAGAAGGTCAG 150881
Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735
|| ||||| ||||||||||| |||||||| || |||| || || | || |||||
Sbjct 150880 ACCGGGCATAAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAA 150821
Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTA-----ACTTGT-ATCATT 39789
||| || || || || || || ||||| || | || || | |||| | ||| |
Sbjct 150820 GATACCCTCAACGGCGGCGAAGGCAACGAGACGCTGGGCGAAGGAGGACTTCTCATCGCT 150761
Query 39790 ATGTATCCACTTCTGTGCCCAATCAGCTTTCTT 39822
| ||||||||| | ||||| || || |||||
Sbjct 150760 A---ATCCACTTCAGGGCCCAGTCGGCCTTCTT 150731
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686902008189240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |