Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001618725.1_202016- 04-12] 1,647 sequences; 53,491,261 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq273 96.9 7e-15 >seq273 Length=152475 Score = 96.9 bits (106), Expect = 7e-15 Identities = 112/150 (75%), Gaps = 6/150 (4%) Strand=Plus/Minus Query 94407 CTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAGGCCAGGGCA 94466 ||| || ||||||||||| |||| |||||| ||||| | | ||||| ||||||||||| Sbjct 71995 CTCGTACTTCTCGTACAAGGCCTCAAACTCCTCGCCGTAGCAGTCGGCCAGGCCAGGGCA 71936 Query 94467 CTCGTGGGGGCACATCAGGGACCAATTCTTCCCAGCCTT---CACTCTCTCCATGAAGAG 94523 |||| ||||||||| || | ||| | |||| ||| ||| |||| ||||||||| Sbjct 71935 TTCGTTGGGGCACATGAGAGTCCA---GTCCCCATTCTTCTCCACCCTCTTCATGAAGAG 71879 Query 94524 ATCAGATACCCAGATAGCTGGGAAAAGATC 94553 || | | ||||| || ||||||| || Sbjct 71878 GTCGGGAATCCAGAGGGCGAGGAAAAGGTC 71849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989563117612885