Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001618725.1_202016-
04-12] 1,647 sequences; 53,491,261 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq132 111 2e-19
>seq132
Length=157463
Score = 111 bits (122), Expect = 2e-19
Identities = 165/234 (71%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 142955 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 143014
|| ||||| || | ||| | || | ||||| || || || || || |||||||||||
Sbjct 13324 TGACCTCCACGCAGACGAAGGACAAGATGAAGCGTCGACTCCTTCTGGATGTTGTAATCA 13265
Query 143015 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 143074
|||| |||| || || | || ||||||||| |||| ||||| ||||| ||||||
Sbjct 13264 CTCAAGGTGCGACCATCCTCCAACTGCTTACCAGCAAAGATAAGACGCTGCTGGTCGGGA 13205
Query 143075 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCT 143134
|| ||||| || ||||| ||| || || | | || | |||||||| | ||
Sbjct 13204 GGAATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATCGTGTCCGAAGACTCG 13145
Query 143135 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 143188
|| || | || | |||||| || ||||| || || ||||| ||||||||| ||
Sbjct 13144 ACCTCTAGTGTAATCGTCTTTCCAGTCAAGGTCTTGACGAAAATTTGCATACCT 13091
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507003961841040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |