Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001618725.1_202016-
04-12] 1,647 sequences; 53,491,261 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq273 499 6e-136
seq1177 237 3e-57
>seq273
Length=152475
Score = 499 bits (552), Expect = 6e-136
Identities = 1200/1787 (67%), Gaps = 79/1787 (4%)
Strand=Plus/Minus
Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149
||| || ||||| ||||| || | || || || |||||||||| |||| | || ||
Sbjct 72787 GTTGACAACCTGGAACTCACCAGCAAGAACACGACGCTGGTAGATGTTGGAGGTGTAGGG 72728
Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209
||| | || ||| ||||||||| ||||||| ||||| |||||||||||||||| ||
Sbjct 72727 CTCAAAGCACTCGTTGTTGCCCAAGATCTGCGAGGTGCTGGCAGTCGGCATGGGCGCGAC 72668
Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAG---TC 244266
|| ||| ||| | || |||||| ||| | |||| ||| ||| | ||
Sbjct 72667 GAGAAGAGAGTTGCGGACACCGTGC-------TGCTTAATCTG--CTCCTTCAAAGCATC 72617
Query 244267 CCACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTT 244326
||| | || |||| ||| | | |||| |||||||||| |||| || | ||||
Sbjct 72616 CCA---GTCCCAGAGATCCGAGGGCTTGACATTCCACATGTCATACTGGAGGATGCCCTG 72560
Query 244327 GCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGC 244385
|| ||| |||||||| ||| ||||||| || || || |||||||| || |
Sbjct 72559 AGAAACAGGGGAACCCTCGTACGTCTGGTAGGGGCCCTCCTCCTTGGCCAGCTGCACCGA 72500
Query 244386 TCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCT 244445
| || |||||| |||| ||||||||||||||||||| ||||||| | |||||| ||||
Sbjct 72499 CATGGT-GAGGGCAGCGTGGTAGATGGTCTCGAAGATCTTCTTGTTGAGGTCGCGAGCCT 72441
Query 244446 TGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGA 244505
| | |||||| || | | || |||| | || || || ||||| || ||||
Sbjct 72440 CGGGAGACTCGAAGGGCATACGGAGAGCCAGGAAGGCATCAGCAAGACCCTGGACACCGA 72381
Query 244506 TGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGC 244565
|||||||| | ||| ||| ||||| | || || | || ||||| ||||
Sbjct 72380 GACCGATGGGGCGGTGGCGCATGTTGCTGTTGCGAGCCTCCTGAACAGGGTAGTGGTTGA 72321
Query 244566 CGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAA 244625
||||||| | |||| ||||||||| | | || ||| ||| ||| ||| |
Sbjct 72320 CGTCGATGATTCTGTTCAGGTTGCGGACAACGACCTGGGTGACCTCGTGGAGCTTCTGGA 72261
Query 244626 AGTCGTA--CTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGAC 244683
||||||| ||| ||||| | | || | ||||| | |||||||
Sbjct 72260 AGTCGTAGACTC--------CCTCGTTG-TAGTCA-----ACAAAGGTGGGCAGGGCGAG 72215
Query 244684 GCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCA 244743
||||||||||||||| || ||||| || | | ||||| || |||||| |||||
Sbjct 72214 CGAGGCCAGGTTGCAGACAGCGACCTCATCAGGCGCGCAGTACTCGATAATCTCCGTGCA 72155
Query 244744 GAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTC 244803
|||||| || ||| ||||| |||| || || ||| |||| |||| ||| ||
Sbjct 72154 GAGGTTGGAGCTGCGGATAGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGGCGGCATC 72095
Query 244804 CTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAG 244863
|||||||||||||||||| || |||||| |||||| |||||| | | ||||||
Sbjct 72094 CTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCGAGGATGGCATACCAGAG 72035
Query 244864 GTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCC-TCTGCCTCGTAGCGGGTGTACAGGG 244922
| | |||||| | ||| ||||| |||||||| ||||| ||||| ||||| ||
Sbjct 72034 CTTCTGAGCCTTCATGGTCTTGCGACCCTTGCCCATCTGC-TCGTACTTCTCGTACAAGG 71976
Query 244923 CCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCA--CGACGCCGGGCACATGAG 244980
|||| ||||| ||| || ||| | ||||| ||||| || | |||||||||||
Sbjct 71975 CCTCAAACTCCTCGCCGTAGCAGTCGGCCAGGCCAGGGCATTCGTTG--GGGCACATGAG 71918
Query 244981 ACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTG 245040
| |||| || || | || ||||||| ||||||||||||||| ||||||||||| |
Sbjct 71917 AGTCCAGTCCCCATTCTTCTCCACCCTCTTCATGAAGAGGTCGGGAATCCAGAGGGCGAG 71858
Query 245041 GAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTC 245100
||| ||||| | || | ||| ||| ||| |||||| | || ||||| |||||
Sbjct 71857 GAAAAGGTCACGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGCAAATCCAAGAAGTC 71798
Query 245101 AAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCC 245160
||||| ||| ||||||| ||||| | ||| | |||| || ||||| |||||||||||
Sbjct 71797 GAAGACATCGGCGTGCCAAGGCTCAAGGTAAATGGCGAAAGCACCGGGGCGCTTGTTGCC 71738
Query 245161 TCCCTGGTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGC 245216
|||||||| | | | ||||| |||||||| || || |||| || | |
Sbjct 71737 ACCCTGGTCGA----CGTAGCGAGCAGTGTTGTTGAAGACACGGAGCATAGGGACGACAC 71682
Query 245217 CGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGG 245276
|||| ||| ||||| ||||| || || | ||| || | | || ||| | |||
Sbjct 71681 CGTTGGAGGTACCGTTCGTGCCGGCAATATATGAGCCGGTGGC---GCGGATGC-GGTGG 71626
Query 245277 AC----ATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCT 245332
|| | || | || ||||| ||||||||| | |||||| |||||| ||||||
Sbjct 71625 ACGTTGAGACCAATGCCACCGGCCATCTTGGAGATCATGGCGCAAGTCTTGAGGGTGTCA 71566
Query 245333 GCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGC 245392
|| ||||| || |||| |||||||| || || ||||| ||||||||||||| |
Sbjct 71565 TAGATACCCTCAATAGAGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGACAGCTGGGCC 71506
Query 245393 TTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGG 245452
| ||| | | | |||||| || ||||| |||||| || ||| | |||||| |
Sbjct 71505 TGAGGGGTACCGGCGTTGAAGAGTGTGGGAGAGGCGTGAGTGAAGAACTTGCTCGACATC 71446
Query 245453 AACCCGTACGTCTGGA-GCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCT 245511
| ||| || | || | | || || | || ||| || ||| | |||| |
Sbjct 71445 AGGTTGTAGGTTTCGATGACGCGC-TCAACGTCGTCACCCCAGATACCAACGGCGACACG 71387
Query 245512 CATGAGGGTGTGCTGGGGCGTCTCG---ATGGGTCCCTCGGGTCCCTTGAGCATGTAGGA 245568
||||| |||||||||| ||||| || || || | |||||| | ||| ||
Sbjct 71386 CATGATCATGTGCTGGGGTCTCTCGGCAATCTTGCCGTCAAG---CTTGAGGAGGTATGA 71330
Query 245569 GCGCTCGAGCGTCTTGAACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGC 245628
| ||| | |||||||| || ||||| |||| |||||| || | || |||
Sbjct 71329 TCTCTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCGCGGTCATAGACGATGGC 71270
Query 245629 TGCGTCGAGTCTC-TCGGCGTGCTTC-TGACTGACCTCGTA--AAACTTTTGCGCT-ATG 245683
| ||| || ||| || |||| || |||| | | ||||| | ||||| | |||
Sbjct 71269 AGAGTCAAG-CTCATCCTTGTGCCTCATGACAG-CGTCGTATGTGTCCTTTGCAATCATG 71212
Query 245684 AGGGGAGCCCTGAGCCCGGTGTCCGGATTGACGTTGAACCAGAGCCTCTTGCACACCTCC 245743
| | ||| || ||| | | || ||||||| | |||| | || || ||
Sbjct 71211 GGAGACGCCTTG---CCGTTCTTGGGGTTGACGTAGTGGTAGAG---GTCGCTGACAACC 71158
Query 245744 GAGAAC--TTGGGGC-TGGTGAGCTTATGCAGGTTGGTGACTGCTATGCGCGCCGCCAAC 245800
|| || ||| | |||| |||| || ||||||| |||||| || || || ||||
Sbjct 71157 GAAGACCATTGCTTCTTGGTTTGCTTGTGGAGGTTGGAGACTGCGATACGAGCAGCCAGG 71098
Query 245801 TTGCTGTAGTCGGGGTGAGTGGTGGTCATGTTGGAGGCCGTGTGGGC 245847
|| |||||||||||| ||| |||||||| || || || | |||
Sbjct 71097 ATGGCGTAGTCGGGGTGGGTGACGGTCATGTAGGCAGCAGTTTCGGC 71051
>seq1177
Length=83355
Score = 237 bits (262), Expect = 3e-57
Identities = 373/524 (71%), Gaps = 25/524 (5%)
Strand=Plus/Minus
Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACG-CAAC 42691
||||||||| |||||||| |||||||| || || ||||| || | || | | |
Sbjct 26918 CCCTGCATCCGCAAGAAGGCCGACTGGGCCCTGAAGTGGATT-AGCGATGAGAAGTCCTC 26860
Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751
|||| | || | || || ||||| ||||||| ||||| ||||||||| || |||||
Sbjct 26859 CTTCGCCCAGCGTCTCGTTGCCTTCGCCGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTT 26800
Query 42752 CGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCG-ATGCCCGGACTCACCTTCTCGAACG 42810
|||||||||||||||||||||| || | ||| |||||||| || |||||||| ||||
Sbjct 26799 CGCCTCCATCTTCTGGCTCAAGAAGCGTG-GTCTTATGCCCGGTCTGACCTTCTCCAACG 26741
Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870
| || ||| | || ||||| || || | ||||| ||||||||||| | ||| |
Sbjct 26740 AGCTGATCTCTCGTGATGAGGGTCTTCACACCGACTTCGCCTGCCTCCTCTACTC---TC 26684
Query 42871 ACCTCAGGCACAAGCCCTCGAAGGAGCGGGTC---CGGGCCATCATCACGGAGGCCGTGG 42927
|||||| | || |||| | | ||| |||| || ||||||| || || ||
Sbjct 26683 ACCTCAAGAAC-CGCCCCAGCA--AGCAGGTCATTGAGGACATCATCGTCGATGCTGTCA 26627
Query 42928 AGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACG 42987
|||| ||| |||||||||| || || | ||||| | ||| ||||||||||| |
Sbjct 26626 AGATTGAGCAGGAGTTCCTGACCGAGGCTCTGCCTTGCGCTCTGCTCGGCATGAACTCCA 26567
Query 42988 ACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCA 43047
|||| ||| ||||||| ||| || ||||||| ||| | | | | ||||
Sbjct 26566 ACCTGATGAAGCAGTACATTGAGTTTGTTGCCGACCGCCTCTT------GGTTGCTCTCG 26513
Query 43048 GC--CGCC----TCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGG 43101
|| | | ||||||| | | |||||| ||||| |||||||||||||| |||
Sbjct 26512 GCAATGACAAGGTCTACAAGTCTTCCAACCCCTTTGACTTCATGGAGAACATCTCCCTGG 26453
Query 43102 AGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145
|||||||||||||| || |||||||| || ||||||||||||
Sbjct 26452 GCGGCAAGACCAACTTCTTTGAGAAGCGTGTTGCCGACTACCAG 26409
Score = 134 bits (148), Expect = 3e-26
Identities = 218/310 (70%), Gaps = 13/310 (4%)
Strand=Plus/Minus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||||| || ||| ||||||||||||||||||||| |||
Sbjct 27314 ATCTGGCAGATGTACAAGAAGGCTGAGGCCTCTTTCTGGACCGCCGAGGAGATTGATCTG 27255
Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTG---TCT--GAGAACGAAAAGTTTTTCCTCA 42414
||||||| || |||| | || | || ||| | || |||| ||| ||
Sbjct 27254 TCCAAGGATCTCCACGACTGGAA--CAATAAGATCAACGAGGATGAGAAGTACTTCATCT 27197
Query 42415 AAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCA 42474
|||| || |||||||||||||| ||||||||||| |||||||||||| ||| |
Sbjct 27196 CGCACATCCTCGCCTTCTTCGCCGCTTCTGACGGCATTGTCAATGAGAACTTGGTCGAGC 27137
Query 42475 GGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCA 42534
| |||| ||||| ||| | ||||| || |||||||| |||||||| || |
Sbjct 27136 GCTTCAGCGGCGAGGTCCAGGTCCCCGAGGCCCGTTGCTTCTATGGCTTCCAAATCATGA 27077
Query 42535 TAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATC 42591
| |||||| | ||||| ||| ||| | ||||||| |||| |||||| ||| |
Sbjct 27076 TGGAGAACATCCACTCCGAGACCTACTC---GCTGCTCATCGACACCTACATCAAGGAGC 27020
Query 42592 CCGTCGAGCG 42601
| | | ||||
Sbjct 27019 CTGCCCAGCG 27010
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944319758416720
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