Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001618725.1_202016-
04-12] 1,647 sequences; 53,491,261 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq273 271 9e-68
>seq273
Length=152475
Score = 271 bits (300), Expect = 9e-68
Identities = 1173/1834 (64%), Gaps = 47/1834 (3%)
Strand=Plus/Minus
Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624
||||||||||||| || |||| | || ||||||||||| |||||||| || |
Sbjct 73124 TGAACTGAATGGGAGCAGCAGCAGCCTGCGTGCGCAGGTAGTACATGCCCGTCTTCAGGC 73065
Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 113684
| |||||||| | | |||||| || | |||| | || || | ||||
Sbjct 73064 CGAGCTTCCAGCCGGCGAAATGCATGCTGGTTATCTTGCCCATGGTCGGGTCCTTCATGT 73005
Query 113685 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCA 113744
| ||| | || || || ||||||||| ||||| || || ||||| | | |
Sbjct 73004 GAATGTTGAGCGACTGCGACTGGTCGATGAAGGCACCACGGTCGGCAGCCATCTGCACAA 72945
Query 113745 CATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATAT 113804
|| | | ||| ||||| ||||| |||| ||| ||| | ||| || || |
Sbjct 72944 CAGTACGCTGCGAGATCTCCCAAACAGTCTTGTACAGGGCCTTGACCTCAGTAGGAATGT 72885
Query 113805 CCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGA---GATCCTTCATATCCTTTG 113861
||| || |||||||| ||| || | | |||| | | |||||| | | |
Sbjct 72884 TGGGGATGTTCTGGATGGA---ACCGTTCTCGGCAATGATGCGGTTCTTCATGGCATCGG 72828
Query 113862 ACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCAC 113921
|||| ||||| || | |||||||| || ||| |||||||| |||||||
Sbjct 72827 ACCACAGACCCATGTCGACGAGATCCTTCAAGAGCCAAGGGTTGACAACCTGGAACTCAC 72768
Query 113922 CCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTAC 113981
| || || || | | | ||||| |||| ||||| |||||||||||||| ||||| |
Sbjct 72767 CAGCAAGAACACGACGCTGGTAGATGTTGGAGGTGTAGGGCTCAAAGCACTCGTTGTTGC 72708
Query 113982 CCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGAC 114041
||||||| || | |||| ||| || |||||||| || | |||||| ||| |||| ||
Sbjct 72707 CCAAGATCTGCGAGGTGCTGGCAGTCGGCATGGGCGCGACGAGAAGAGAGTTGCGGACAC 72648
Query 114042 CCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCT 114101
| | | | |||| | ||||| | || |||||||| || | | || | |
Sbjct 72647 CGTGCTGCTTAATCTGCTCCTTCAAAGCATCCCAGTCCCAGAGATCCGAGGGCTTGACAT 72588
Query 114102 GCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATG 114161
|||||| ||| |||||||||| || || || | || || ||||| | |||| ||| |
Sbjct 72587 TCCACATGTCATACTGGAGGATGCCCTGAGAAACAGGGGAACCCTCGTACGTCTGGTAGG 72528
Query 114162 GGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCT 114218
||||||| ||| |||| | | || | | |||||| ||||| || || ||||
Sbjct 72527 GGCCCTCCTCCTTGGCCAGCTGCACCGACATGG---TGAGGGCAGCGTGGTAGATGGTCT 72471
Query 114219 CAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAA 114278
| || || || | | |||||| || || || | | ||| |
Sbjct 72470 CGAAGATCTTCTTGTTGAGGTCGCGAGCCTCGGGAGACTCGAAGGGCATACGGAGAGCCA 72411
Query 114279 TAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACT 114338
|| |||| || ||||| ||||||||||| || || ||||| || | ||| || |
Sbjct 72410 GGAAGGCATCAGCAAGACCCTGGACACCGAGACCGATGGGGCGGTGGCGCATGTTGCTGT 72351
Query 114339 TTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGA 114398
| ||||| || || || || || ||||| | || || || || | |
Sbjct 72350 TGCGAGCCTCCTGAACAGGGTAGTGGTTGACGTCGATGATTCTGTTCAGGTTGCGGACAA 72291
Query 114399 CAACCTTTGTGATTTCATGAAGCTTTTCGTAATC-AAAACTGCGAGTCTCTTCATTG--- 114454
| |||| |||| || || ||||| | | | || | ||| | ||| | | |
Sbjct 72290 CGACCTGGGTGACCTCGTGGAGCTTCTGGAAGTCGTAGACTCC----CTCGTTGTAGTCA 72235
Query 114455 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 114514
||| | | || ||||||| || ||||| || || |||| | |||||| | |
Sbjct 72234 ACAAAGGTGGGCAGGGCGAGCGAGGCCAGGTTGCAGACAGCGACCTCATCAGGCGCGCAG 72175
Query 114515 TACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 114574
||||| ||||| ||||| || | || || || || ||||| | |||||| || ||
Sbjct 72174 TACTCGATAATCTCCGTGCAGAGGTTGGAGCTGCGGATAGTGCCAAGGTTCTTCTGGTTG 72115
Query 114575 GACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGAC 114634
||| ||| ||||||||||| |||||| | || | || ||||| || |||| |
Sbjct 72114 CTCTTGCGGTTGGCGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCC 72055
Query 114635 TTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTG----GCTCGCCCCT 114689
| ||| || || | ||||| | || | | || || ||| ||| || |||| |
Sbjct 72054 TCGAGGATGGCATACCAGAGCTTCTGAGCCT-TCA---TGGTCTTGCGACCCTTGCCCAT 71999
Query 114690 CCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTG 114749
|| ||||||||| ||| | ||| |||||||| || || | || | || || |
Sbjct 71998 -CTGCTCGTACTTCTCGTACAAGGCCTCAAACTCCTCGCCGTAGCAGTCGGCCAGGCCAG 71940
Query 114750 GTGCCTT-ATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAG 114808
| || || | ||||| | ||||| ||| | ||| || ||| || | ||||||||||
Sbjct 71939 G-GCATTCGTTGGGGCACATGAGAGTCCAGTCCCCATTCTTCTCCACCCTCTTCATGAAG 71881
Query 114809 AGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGA 114868
||||| || |||||||| || ||| || || || |||| | || || | || ||
Sbjct 71880 AGGTCGGGAATCCAGAGGGCGAGGAAAAGGTCACGGGCGCGAACCTCCTCCTTGCCGTGG 71821
Query 114869 TTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCG 114928
|| ||||| ||||| ||||| | || ||| |||||||| || || ||||| | |||
Sbjct 71820 TTCTTGCGCAAATCCAAGAAGTCGAAGACATCGGCGTGCCAAGGCTCAAGGTAAATGGCG 71761
Query 114929 ATTG-AC-----CCCTTACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAAT 114982
| | || | ||| | | ||| |||||| || || | || ||| || ||
Sbjct 71760 AAAGCACCGGGGCGCTT--GTTG-CCACCCTGGTCGACGTAGCGAGCAGTGTTGTTGAAG 71704
Query 114983 ACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTA 115042
|| || ||||| || | || ||| | || || || || || |||| ||
Sbjct 71703 ACACGGAGCATAGGGACGACACCGTTGGAGGTACCGTTCGTGCCGGCAATATATGAGCCG 71644
Query 115043 TTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCG 115102
|||| | || |||| || | |||||| || || ||| ||| ||||| |||
Sbjct 71643 GTGGCGCGGATGCGGTGGACGTTGAGACCAATGCCACCGGCCATCTTGGAGATCATGGCG 71584
Query 115103 CACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAG 115162
|| | |||| || | ||||| || || || ||||| |||| | ||| ||||||
Sbjct 71583 CAAGTCTTGAGGGTGTCATAGATACCCTCAATAGAGTCCTCCTTCATGTCGACGAGGAAG 71524
Query 115163 CAGCTCGACATTTGTGGCCT-TGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGAT 115221
|| |||| || ||||| || ||||| ||||||||||| || || | ||||| |
Sbjct 71523 CAAGAGGACAGCTG-GGCCTGAGGGGTACCGGCGTTGAAGAGTGTGGGAGAGGCGTGAGT 71465
Query 115222 GAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCG 115279
|| | | |||| |||||| | |||||| || | |||| || ||| || ||
Sbjct 71464 GA--AGAACTTGCTCGACATCAGGTTGTAGGTTTCGATGACGCGCTCAACGTCGTCACCC 71407
Query 115280 TGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCG 115339
||||| | | ||| ||||| | ||||| |||||| | || | | || ||
Sbjct 71406 CAGATACCAACGGCGACACGCATGATCATGTGCTGGGGTCTCTCGGCAATCTTGCCGTCA 71347
Query 115340 AGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGA 115373
||| | ||||||| ||||||| |||||||
Sbjct 71346 AGCTTGAGGAGGTATGATCTCTCCAAAGTCTTGA 71313
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597341301982760
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