Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001618725.1_202016-
04-12] 1,647 sequences; 53,491,261 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq273 383 2e-101
>seq273
Length=152475
Score = 383 bits (424), Expect = 2e-101
Identities = 1097/1672 (66%), Gaps = 40/1672 (2%)
Strand=Plus/Plus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||| | |||||| ||| |||||| || |||||||||||| | || |||
Sbjct 71294 AACTACCAATACTTCGGCTTCAAGACTTTGGAGAGATCATACCTCCTCAAGCTTGACGGC 71353
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| | || ||||| |||| || || || | ||||| |||||| | || || || ||
Sbjct 71354 AAGATTGCCGAGAGACCCCAGCACATGATCATGCGTGTCGCCGTTGGTATCTGGGGTGAC 71413
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894
||| | | || | | | || ||| | |||| | || |||
Sbjct 71414 GACGTTGAGCGCGTCATCGAAACCTACAACCTGATGTCGAGCAAGTTCTTCACTCACGCC 71473
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953
| || || || |||||||| || ||||| | | ||| |||| || || ||||| |
Sbjct 71474 TCTCCCACACTCTTCAACGCCGGTACCCCTCAGGCCCAGCTGTCCTCTTGCTTCCTCGTC 71533
Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013
||| | |||| ||||| || || || | |||| ||||||| || || | ||
Sbjct 71534 GAC-ATGAAGGAGGACTCTATTGAGGGTATCTATGACACCCTCAAGACTTGCGCCATGAT 71592
Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073
||| || || || || || || ||| |||||| | | || |||| || || ||
Sbjct 71593 CTCCAAGATGGCCGGTGGCATTGGTCTCAACGTCCACCGCATCCGCGCCACCGGCTCATA 71652
Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133
|| ||| || || || ||||||||||| |||||||||||||||| |||||||||||
Sbjct 71653 TATTGCCGGCACGAACGGTACCTCCAACGGTGTCGTCCCTATGCTCCGTGTCTTCAACAA 71712
Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193
| | || |||||||| ||||||||||| | | | ||| ||||||| | || ||
Sbjct 71713 CACTGCTCGCTACGTCGACCAGGGTGGCAACAAGCGCCCCGGTGCTTTCGCCATTTACCT 71772
Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253
||||| |||||||| || || | ||| | || |||| |||||||||||||| ||
Sbjct 71773 TGAGCCTTGGCACGCCGATGTCTTCGACTTCTTGGATTTGCGCAAGAACCACGGCAAGGA 71832
Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313
|| | ||| | ||||| ||| ||| |||||| | || ||||| || ||||| |
Sbjct 71833 GGAGGTTCGCGCCCGTGACCTTTTCCTCGCCCTCTGGATTCCCGACCTCTTCATGAAGAG 71892
Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373
|| ||||| || | ||||| ||| | || ||||| ||||| || || ||| ||||
Sbjct 71893 GGTGGAGAAGAATGGGGACTGGACTCTCATGTGCCCCAACGAATGCCCTGGCCTGGCCGA 71952
Query 94374 CGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAG 94433
| | || | ||||| | |||||| | ||||| | |||||||| |
Sbjct 71953 CTGCTACGGCGAGGAGTTTGAGGCCTTGTACGAGAAGTACGAGCAGATGGGCAAGGGTCG 72012
Query 94434 GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493
||| ||| | ||| |||||| ||| || ||| | || | ||| ||||| ||
Sbjct 72013 CAAGACCATGAAGGCTCAGAAGCTCTGGTATGCCATCCTCGAGGCCCAGACCGAGACTGG 72072
Query 94494 TACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGG 94553
|| |||| ||| | | |||||| | | |||| |||| ||||||| || |||| ||
Sbjct 72073 TAACCCCTTCATGCTCTACAAGGATGCCGCCAACCGCAAGAGCAACCAGAAGAACCTTGG 72132
Query 94554 GGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613
||| ||||| || || ||||| |||||| ||||||| | || || ||| |
Sbjct 72133 CACTATCCGCAGCTCCAACCTCTGCACGGAGATTATCGAGTACTGCGCGCCTGATGAGGT 72192
Query 94614 TGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTC 94673
||||| || ||||||| ||| || |||| |||| || || || ||||| |
Sbjct 72193 CGCTGTCTGCAACCTGGCCTCGCTCGCCCTGCCCACCTTTGT------TGACTACA--AC 72244
Query 94674 TACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTC-TTG---- 94728
| | || | ||| | || |||| | || || | |||| |||
Sbjct 72245 GAGGGAGTC-TACGACTTCCAGAAGCT------CCACGAGGTCACCCAGGTCGTTGTCCG 72297
Query 94729 -AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAA 94787
||||||||||| | |||||| ||| |||||| || | |||||| ||| ||
Sbjct 72298 CAACCTGAACAGAATCATCGACGTCAACCACTACCCTGTTCAGGAGGCTCGCAACAGCAA 72357
Query 94788 CCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGAT 94847
| || || || |||||||| |||| ||||||||| | || || || | || |
Sbjct 72358 CATGCGCCACCGCCCCATCGGTCTCGGTGTCCAGGGTCTTGCTGATGCCTTCCTGGCTCT 72417
Query 94848 GCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCAT 94907
||| |||||| ||| ||| ||| || | | || ||| || ||||| | |||
Sbjct 72418 CCGTATGCCCTTCGAGTCTCCCGAGGCTCGCGACCTCAACAAGAAGATCTTCGAGACCAT 72477
Query 94908 TTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCAC-ACG 94966
|| ||| ||| | | || || || |||||| ||| || ||||| | ||
Sbjct 72478 CTACCACGCTGCCCTCACCATGTCGGTGCAGCTGGCCA---AGGA-GGAGGGCCCCTACC 72533
Query 94967 AATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGA 95026
| ||| | || || || | |||||||| | |||| ||| | ||| ||| |
Sbjct 72534 AGACGTACGAGGGTTCCCCTGTTTCTCAGGGCATCCTCCAGTATGACATGTGGAATGTCA 72593
Query 95027 AGCCCTCGGGTCTGTACGACTGGGAAGCTCT--ACGCGCTGATGTTATCAAACACGGTGT 95084
||||||||| ||| | |||||||| ||| | | | || || ||| | ||||||||
Sbjct 72594 AGCCCTCGGATCTCTGGGACTGGGATGCTTTGAAGGAGCAGA--TTAAGCAGCACGGTGT 72651
Query 95085 GAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAA 95144
||| | || || || || |||||||| || ||| ||| |||||||| | |||||
Sbjct 72652 CCGCAACTCTCTTCTCGTCGCGCCCATGCCGACTGCCAGCACCTCGCAGATCTTGGGCAA 72711
Query 95145 CAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGA 95204
|||||||| || || |||| |||||||||| | ||| | | || || || || || ||
Sbjct 72712 CAACGAGTGCTTTGAGCCCTACACCTCCAACATCTACCAGCGTCGTGTTCTTGCTGGTGA 72771
Query 95205 ATTCCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGG---G 95260
|||| || ||||| ||| | ||| || | || | ||||| ||||| |
Sbjct 72772 GTTCCAGGTTGTCAACCCTTGGCTCTTGAAGGATCTCGTCGAC-ATGGGTCTGTGGTCCG 72830
Query 95261 GTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAA 95320
|| || | ||||||| | | || ||||| ||| ||||||||||||| | |
Sbjct 72831 ATGCCA---TGAAGAACCGCATCATTGCCGAGAACGGTTCCATCCAGAACATCCCCAACA 72887
Query 95321 TACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372
| || || ||||||| || |||||||| || ||||||||| |||||||
Sbjct 72888 TTCCTACTGAGGTCAAGGCCCTGTACAAGACTGTTTGGGAGATCTCGCAGCG 72939
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494713014886120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |