Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001618735.1_202016-
04-12] 476 sequences; 53,216,229 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq188 383 2e-101
>seq188
Length=580545
Score = 383 bits (424), Expect = 2e-101
Identities = 1097/1672 (66%), Gaps = 40/1672 (2%)
Strand=Plus/Plus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||| | |||||| ||| |||||| || |||||||||||| | || |||
Sbjct 491402 AACTACCAATACTTCGGCTTCAAGACTTTGGAGAGATCATACCTCCTCAAGCTTGACGGC 491461
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| | || ||||| |||| || || || | ||||| |||||| | || || || ||
Sbjct 491462 AAGATTGCCGAGAGACCCCAGCACATGATCATGCGTGTCGCCGTTGGTATCTGGGGTGAC 491521
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894
||| | | || | | | || ||| | |||| | || |||
Sbjct 491522 GACGTTGAGCGCGTCATCGAAACCTACAACCTGATGTCGAGCAAGTTCTTCACTCACGCC 491581
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953
| || || || |||||||| || ||||| | | ||| |||| || || ||||| |
Sbjct 491582 TCTCCCACACTCTTCAACGCCGGTACCCCTCAGGCCCAGCTGTCCTCTTGCTTCCTCGTC 491641
Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013
||| | |||| ||||| || || || | |||| ||||||| || || | ||
Sbjct 491642 GAC-ATGAAGGAGGACTCTATTGAGGGTATCTATGACACCCTCAAGACTTGCGCCATGAT 491700
Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073
||| || || || || || || ||| |||||| | | || |||| || || ||
Sbjct 491701 CTCCAAGATGGCCGGTGGCATTGGTCTCAACGTCCACCGCATCCGCGCCACCGGCTCATA 491760
Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133
|| ||| || || || ||||||||||| |||||||||||||||| |||||||||||
Sbjct 491761 TATTGCCGGCACGAACGGTACCTCCAACGGTGTCGTCCCTATGCTCCGTGTCTTCAACAA 491820
Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193
| | || |||||||| ||||||||||| | | | ||| ||||||| | || ||
Sbjct 491821 CACTGCTCGCTACGTCGACCAGGGTGGCAACAAGCGCCCCGGTGCTTTCGCCATTTACCT 491880
Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253
||||| |||||||| || || | ||| | || |||| |||||||||||||| ||
Sbjct 491881 TGAGCCTTGGCACGCCGATGTCTTCGACTTCTTGGATTTGCGCAAGAACCACGGCAAGGA 491940
Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313
|| | ||| | ||||| ||| ||| |||||| | || ||||| || ||||| |
Sbjct 491941 GGAGGTTCGCGCCCGTGACCTTTTCCTCGCCCTCTGGATTCCCGACCTCTTCATGAAGAG 492000
Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373
|| ||||| || | ||||| ||| | || ||||| ||||| || || ||| ||||
Sbjct 492001 GGTGGAGAAGAATGGGGACTGGACTCTCATGTGCCCCAACGAATGCCCTGGCCTGGCCGA 492060
Query 94374 CGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAG 94433
| | || | ||||| | |||||| | ||||| | |||||||| |
Sbjct 492061 CTGCTACGGCGAGGAGTTTGAGGCCTTGTACGAGAAGTACGAGCAGATGGGCAAGGGTCG 492120
Query 94434 GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493
||| ||| | ||| |||||| ||| || ||| | || | ||| ||||| ||
Sbjct 492121 CAAGACCATGAAGGCTCAGAAGCTCTGGTATGCCATCCTCGAGGCCCAGACCGAGACTGG 492180
Query 94494 TACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGG 94553
|| |||| ||| | | |||||| | | |||| |||| ||||||| || |||| ||
Sbjct 492181 TAACCCCTTCATGCTCTACAAGGATGCCGCCAACCGCAAGAGCAACCAGAAGAACCTTGG 492240
Query 94554 GGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613
||| ||||| || || ||||| |||||| ||||||| | || || ||| |
Sbjct 492241 CACTATCCGCAGCTCCAACCTCTGCACGGAGATTATCGAGTACTGCGCGCCTGATGAGGT 492300
Query 94614 TGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTC 94673
||||| || ||||||| ||| || |||| |||| || || || ||||| |
Sbjct 492301 CGCTGTCTGCAACCTGGCCTCGCTCGCCCTGCCCACCTTTGT------TGACTACA--AC 492352
Query 94674 TACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTC-TTG---- 94728
| | || | ||| | || |||| | || || | |||| |||
Sbjct 492353 GAGGGAGTC-TACGACTTCCAGAAGCT------CCACGAGGTCACCCAGGTCGTTGTCCG 492405
Query 94729 -AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAA 94787
||||||||||| | |||||| ||| |||||| || | |||||| ||| ||
Sbjct 492406 CAACCTGAACAGAATCATCGACGTCAACCACTACCCTGTTCAGGAGGCTCGCAACAGCAA 492465
Query 94788 CCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGAT 94847
| || || || |||||||| |||| ||||||||| | || || || | || |
Sbjct 492466 CATGCGCCACCGCCCCATCGGTCTCGGTGTCCAGGGTCTTGCTGATGCCTTCCTGGCTCT 492525
Query 94848 GCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCAT 94907
||| |||||| ||| ||| ||| || | | || ||| || ||||| | |||
Sbjct 492526 CCGTATGCCCTTCGAGTCTCCCGAGGCTCGCGACCTCAACAAGAAGATCTTCGAGACCAT 492585
Query 94908 TTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCAC-ACG 94966
|| ||| ||| | | || || || |||||| ||| || ||||| | ||
Sbjct 492586 CTACCACGCTGCCCTCACCATGTCGGTGCAGCTGGCCA---AGGA-GGAGGGCCCCTACC 492641
Query 94967 AATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGA 95026
| ||| | || || || | |||||||| | |||| ||| | ||| ||| |
Sbjct 492642 AGACGTACGAGGGTTCCCCTGTTTCTCAGGGCATCCTCCAGTATGACATGTGGAATGTCA 492701
Query 95027 AGCCCTCGGGTCTGTACGACTGGGAAGCTCT--ACGCGCTGATGTTATCAAACACGGTGT 95084
||||||||| ||| | |||||||| ||| | | | || || ||| | ||||||||
Sbjct 492702 AGCCCTCGGATCTCTGGGACTGGGATGCTTTGAAGGAGCAGA--TTAAGCAGCACGGTGT 492759
Query 95085 GAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAA 95144
||| | || || || || |||||||| || ||| ||| |||||||| | |||||
Sbjct 492760 CCGCAACTCTCTTCTCGTCGCGCCCATGCCGACTGCCAGCACCTCGCAGATCTTGGGCAA 492819
Query 95145 CAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGA 95204
|||||||| || || |||| |||||||||| | ||| | | || || || || || ||
Sbjct 492820 CAACGAGTGCTTTGAGCCCTACACCTCCAACATCTACCAGCGTCGTGTTCTTGCTGGTGA 492879
Query 95205 ATTCCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGG---G 95260
|||| || ||||| ||| | ||| || | || | ||||| ||||| |
Sbjct 492880 GTTCCAGGTTGTCAACCCTTGGCTCTTGAAGGATCTCGTCGAC-ATGGGTCTGTGGTCCG 492938
Query 95261 GTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAA 95320
|| || | ||||||| | | || ||||| ||| ||||||||||||| | |
Sbjct 492939 ATGCCA---TGAAGAACCGCATCATTGCCGAGAACGGTTCCATCCAGAACATCCCCAACA 492995
Query 95321 TACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372
| || || ||||||| || |||||||| || ||||||||| |||||||
Sbjct 492996 TTCCTACTGAGGTCAAGGCCCTGTACAAGACTGTTTGGGAGATCTCGCAGCG 493047
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494720256396960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |