Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001625265.1_202016-
04-19] 1,046 sequences; 52,836,184 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq268 114 3e-20
>seq268
Length=131150
Score = 114 bits (126), Expect = 3e-20
Identities = 138/188 (73%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 230452 GGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTT 230511
||||||||| | | || ||| |||||||| || || || ||||||||| | || |||
Sbjct 103657 GGCATGAACTCCAACCTGATGAAGCAGTACATTGAGTTTGTTGCCGACCGCCTCTTGGTT 103716
Query 230512 GCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATT 230571
|| || || | || || || ||||| ||| |||||||||| || |||||| |||
Sbjct 103717 GCTCTCGGCAATGACAAGGTCTACAAGTCTTCCAACCCCTTTGACTTCATGGAGAACATC 103776
Query 230572 TCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGT 230631
|| || || |||||||||||||| || |||||||| ||||| |||| | | |||
Sbjct 103777 TCCCTGGGCGGCAAGACCAACTTCTTTGAGAAGCGTGTTGCCGACTACCAGAAGGCCGGT 103836
Query 230632 GTGATGAA 230639
|| |||||
Sbjct 103837 GTCATGAA 103844
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057809823174980
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |