Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001625265.1_202016-
04-19] 1,046 sequences; 52,836,184 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq82 96.9 7e-15
>seq82
Length=153332
Score = 96.9 bits (106), Expect = 7e-15
Identities = 112/150 (75%), Gaps = 6/150 (4%)
Strand=Plus/Minus
Query 94407 CTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAGGCCAGGGCA 94466
||| || ||||||||||| |||| |||||| ||||| | | ||||| |||||||||||
Sbjct 72007 CTCGTACTTCTCGTACAAGGCCTCAAACTCCTCGCCGTAGCAGTCGGCCAGGCCAGGGCA 71948
Query 94467 CTCGTGGGGGCACATCAGGGACCAATTCTTCCCAGCCTT---CACTCTCTCCATGAAGAG 94523
|||| ||||||||| || | ||| | |||| ||| ||| |||| |||||||||
Sbjct 71947 TTCGTTGGGGCACATGAGAGTCCA---GTCCCCATTCTTCTCCACCCTCTTCATGAAGAG 71891
Query 94524 ATCAGATACCCAGATAGCTGGGAAAAGATC 94553
|| | | ||||| || ||||||| ||
Sbjct 71890 GTCGGGAATCCAGAGGGCGAGGAAAAGGTC 71861
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989570737718930
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |