Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001625265.1_202016-
04-19] 1,046 sequences; 52,836,184 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq82 499 6e-136
seq268 237 3e-57
>seq82
Length=153332
Score = 499 bits (552), Expect = 6e-136
Identities = 1200/1787 (67%), Gaps = 79/1787 (4%)
Strand=Plus/Minus
Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149
||| || ||||| ||||| || | || || || |||||||||| |||| | || ||
Sbjct 72799 GTTGACAACCTGGAACTCACCAGCAAGAACACGACGCTGGTAGATGTTGGAGGTGTAGGG 72740
Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209
||| | || ||| ||||||||| ||||||| ||||| |||||||||||||||| ||
Sbjct 72739 CTCAAAGCACTCGTTGTTGCCCAAGATCTGCGAGGTGCTGGCAGTCGGCATGGGCGCGAC 72680
Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAG---TC 244266
|| ||| ||| | || |||||| ||| | |||| ||| ||| | ||
Sbjct 72679 GAGAAGAGAGTTGCGGACACCGTGC-------TGCTTAATCTG--CTCCTTCAAAGCATC 72629
Query 244267 CCACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTT 244326
||| | || |||| ||| | | |||| |||||||||| |||| || | ||||
Sbjct 72628 CCA---GTCCCAGAGATCCGAGGGCTTGACATTCCACATGTCATACTGGAGGATGCCCTG 72572
Query 244327 GCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGC 244385
|| ||| |||||||| ||| ||||||| || || || |||||||| || |
Sbjct 72571 AGAAACAGGGGAACCCTCGTACGTCTGGTAGGGGCCCTCCTCCTTGGCCAGCTGCACCGA 72512
Query 244386 TCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCT 244445
| || |||||| |||| ||||||||||||||||||| ||||||| | |||||| ||||
Sbjct 72511 CATGGT-GAGGGCAGCGTGGTAGATGGTCTCGAAGATCTTCTTGTTGAGGTCGCGAGCCT 72453
Query 244446 TGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGA 244505
| | |||||| || | | || |||| | || || || ||||| || ||||
Sbjct 72452 CGGGAGACTCGAAGGGCATACGGAGAGCCAGGAAGGCATCAGCAAGACCCTGGACACCGA 72393
Query 244506 TGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGC 244565
|||||||| | ||| ||| ||||| | || || | || ||||| ||||
Sbjct 72392 GACCGATGGGGCGGTGGCGCATGTTGCTGTTGCGAGCCTCCTGAACAGGGTAGTGGTTGA 72333
Query 244566 CGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAA 244625
||||||| | |||| ||||||||| | | || ||| ||| ||| ||| |
Sbjct 72332 CGTCGATGATTCTGTTCAGGTTGCGGACAACGACCTGGGTGACCTCGTGGAGCTTCTGGA 72273
Query 244626 AGTCGTA--CTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGAC 244683
||||||| ||| ||||| | | || | ||||| | |||||||
Sbjct 72272 AGTCGTAGACTC--------CCTCGTTG-TAGTCA-----ACAAAGGTGGGCAGGGCGAG 72227
Query 244684 GCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCA 244743
||||||||||||||| || ||||| || | | ||||| || |||||| |||||
Sbjct 72226 CGAGGCCAGGTTGCAGACAGCGACCTCATCAGGCGCGCAGTACTCGATAATCTCCGTGCA 72167
Query 244744 GAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTC 244803
|||||| || ||| ||||| |||| || || ||| |||| |||| ||| ||
Sbjct 72166 GAGGTTGGAGCTGCGGATAGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGGCGGCATC 72107
Query 244804 CTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAG 244863
|||||||||||||||||| || |||||| |||||| |||||| | | ||||||
Sbjct 72106 CTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCGAGGATGGCATACCAGAG 72047
Query 244864 GTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCC-TCTGCCTCGTAGCGGGTGTACAGGG 244922
| | |||||| | ||| ||||| |||||||| ||||| ||||| ||||| ||
Sbjct 72046 CTTCTGAGCCTTCATGGTCTTGCGACCCTTGCCCATCTGC-TCGTACTTCTCGTACAAGG 71988
Query 244923 CCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCA--CGACGCCGGGCACATGAG 244980
|||| ||||| ||| || ||| | ||||| ||||| || | |||||||||||
Sbjct 71987 CCTCAAACTCCTCGCCGTAGCAGTCGGCCAGGCCAGGGCATTCGTTG--GGGCACATGAG 71930
Query 244981 ACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTG 245040
| |||| || || | || ||||||| ||||||||||||||| ||||||||||| |
Sbjct 71929 AGTCCAGTCCCCATTCTTCTCCACCCTCTTCATGAAGAGGTCGGGAATCCAGAGGGCGAG 71870
Query 245041 GAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTC 245100
||| ||||| | || | ||| ||| ||| |||||| | || ||||| |||||
Sbjct 71869 GAAAAGGTCACGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGCAAATCCAAGAAGTC 71810
Query 245101 AAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCC 245160
||||| ||| ||||||| ||||| | ||| | |||| || ||||| |||||||||||
Sbjct 71809 GAAGACATCGGCGTGCCAAGGCTCAAGGTAAATGGCGAAAGCACCGGGGCGCTTGTTGCC 71750
Query 245161 TCCCTGGTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGC 245216
|||||||| | | | ||||| |||||||| || || |||| || | |
Sbjct 71749 ACCCTGGTCGA----CGTAGCGAGCAGTGTTGTTGAAGACACGGAGCATAGGGACGACAC 71694
Query 245217 CGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGG 245276
|||| ||| ||||| ||||| || || | ||| || | | || ||| | |||
Sbjct 71693 CGTTGGAGGTACCGTTCGTGCCGGCAATATATGAGCCGGTGGC---GCGGATGC-GGTGG 71638
Query 245277 AC----ATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCT 245332
|| | || | || ||||| ||||||||| | |||||| |||||| ||||||
Sbjct 71637 ACGTTGAGACCAATGCCACCGGCCATCTTGGAGATCATGGCGCAAGTCTTGAGGGTGTCA 71578
Query 245333 GCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGC 245392
|| ||||| || |||| |||||||| || || ||||| ||||||||||||| |
Sbjct 71577 TAGATACCCTCAATAGAGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGACAGCTGGGCC 71518
Query 245393 TTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGG 245452
| ||| | | | |||||| || ||||| |||||| || ||| | |||||| |
Sbjct 71517 TGAGGGGTACCGGCGTTGAAGAGTGTGGGAGAGGCGTGAGTGAAGAACTTGCTCGACATC 71458
Query 245453 AACCCGTACGTCTGGA-GCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCT 245511
| ||| || | || | | || || | || ||| || ||| | |||| |
Sbjct 71457 AGGTTGTAGGTTTCGATGACGCGC-TCAACGTCGTCACCCCAGATACCAACGGCGACACG 71399
Query 245512 CATGAGGGTGTGCTGGGGCGTCTCG---ATGGGTCCCTCGGGTCCCTTGAGCATGTAGGA 245568
||||| |||||||||| ||||| || || || | |||||| | ||| ||
Sbjct 71398 CATGATCATGTGCTGGGGTCTCTCGGCAATCTTGCCGTCAAG---CTTGAGGAGGTATGA 71342
Query 245569 GCGCTCGAGCGTCTTGAACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGC 245628
| ||| | |||||||| || ||||| |||| |||||| || | || |||
Sbjct 71341 TCTCTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCGCGGTCATAGACGATGGC 71282
Query 245629 TGCGTCGAGTCTC-TCGGCGTGCTTC-TGACTGACCTCGTA--AAACTTTTGCGCT-ATG 245683
| ||| || ||| || |||| || |||| | | ||||| | ||||| | |||
Sbjct 71281 AGAGTCAAG-CTCATCCTTGTGCCTCATGACAG-CGTCGTATGTGTCCTTTGCAATCATG 71224
Query 245684 AGGGGAGCCCTGAGCCCGGTGTCCGGATTGACGTTGAACCAGAGCCTCTTGCACACCTCC 245743
| | ||| || ||| | | || ||||||| | |||| | || || ||
Sbjct 71223 GGAGACGCCTTG---CCGTTCTTGGGGTTGACGTAGTGGTAGAG---GTCGCTGACAACC 71170
Query 245744 GAGAAC--TTGGGGC-TGGTGAGCTTATGCAGGTTGGTGACTGCTATGCGCGCCGCCAAC 245800
|| || ||| | |||| |||| || ||||||| |||||| || || || ||||
Sbjct 71169 GAAGACCATTGCTTCTTGGTTTGCTTGTGGAGGTTGGAGACTGCGATACGAGCAGCCAGG 71110
Query 245801 TTGCTGTAGTCGGGGTGAGTGGTGGTCATGTTGGAGGCCGTGTGGGC 245847
|| |||||||||||| ||| |||||||| || || || | |||
Sbjct 71109 ATGGCGTAGTCGGGGTGGGTGACGGTCATGTAGGCAGCAGTTTCGGC 71063
>seq268
Length=131150
Score = 237 bits (262), Expect = 3e-57
Identities = 373/524 (71%), Gaps = 25/524 (5%)
Strand=Plus/Plus
Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACG-CAAC 42691
||||||||| |||||||| |||||||| || || ||||| || | || | | |
Sbjct 103318 CCCTGCATCCGCAAGAAGGCCGACTGGGCCCTGAAGTGGATT-AGCGATGAGAAGTCCTC 103376
Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751
|||| | || | || || ||||| ||||||| ||||| ||||||||| || |||||
Sbjct 103377 CTTCGCCCAGCGTCTCGTTGCCTTCGCCGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTT 103436
Query 42752 CGCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACG 42810
|||||||||||||||||||||| || ||| | |||||||| || |||||||| ||||
Sbjct 103437 CGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCT-TATGCCCGGTCTGACCTTCTCCAACG 103495
Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870
| || ||| | || ||||| || || | ||||| ||||||||||| | ||| |
Sbjct 103496 AGCTGATCTCTCGTGATGAGGGTCTTCACACCGACTTCGCCTGCCTCCTCTACTC---TC 103552
Query 42871 ACCTCAGGCACAAGCCCTCGAAGGAGCGGGTC---CGGGCCATCATCACGGAGGCCGTGG 42927
|||||| | || |||| | | ||| |||| || ||||||| || || ||
Sbjct 103553 ACCTCAAGAAC-CGCCCCAGCA--AGCAGGTCATTGAGGACATCATCGTCGATGCTGTCA 103609
Query 42928 AGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACG 42987
|||| ||| |||||||||| || || | ||||| | ||| ||||||||||| |
Sbjct 103610 AGATTGAGCAGGAGTTCCTGACCGAGGCTCTGCCTTGCGCTCTGCTCGGCATGAACTCCA 103669
Query 42988 ACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCA 43047
|||| ||| ||||||| ||| || ||||||| ||| | | | | ||||
Sbjct 103670 ACCTGATGAAGCAGTACATTGAGTTTGTTGCCGACCGCCTCTT------GGTTGCTCTCG 103723
Query 43048 GC--CGCC----TCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGG 43101
|| | | ||||||| | | |||||| ||||| |||||||||||||| |||
Sbjct 103724 GCAATGACAAGGTCTACAAGTCTTCCAACCCCTTTGACTTCATGGAGAACATCTCCCTGG 103783
Query 43102 AGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145
|||||||||||||| || |||||||| || ||||||||||||
Sbjct 103784 GCGGCAAGACCAACTTCTTTGAGAAGCGTGTTGCCGACTACCAG 103827
Score = 141 bits (156), Expect = 2e-28
Identities = 236/337 (70%), Gaps = 13/337 (4%)
Strand=Plus/Plus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||||| || ||| |||||||||||||||||||||||||
Sbjct 102922 ATCTGGCAGATGTACAAGAAGGCTGAGGCCTCTTTCTGGACCGCCGAGGAGATTGACCTG 102981
Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTG---TCT--GAGAACGAAAAGTTTTTCCTCA 42414
||||||| || |||| | || | || ||| | || |||| ||| ||
Sbjct 102982 TCCAAGGATCTCCACGACTGGAA--CAATAAGATCAACGAGGATGAGAAGTACTTCATCT 103039
Query 42415 AAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCA 42474
|||| || |||||||||||||| ||||||||||| |||||||||||| ||| |
Sbjct 103040 CGCACATCCTCGCCTTCTTCGCCGCTTCTGACGGCATTGTCAATGAGAACTTGGTCGAGC 103099
Query 42475 GGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCA 42534
| |||| ||||| ||| | ||||| || |||||||| |||||||| || |
Sbjct 103100 GCTTCAGCGGCGAGGTCCAGGTCCCCGAGGCCCGTTGCTTCTATGGCTTCCAAATCATGA 103159
Query 42535 TAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATC 42591
| |||||| | ||||| ||| ||| | ||||||| |||| |||||| ||| |
Sbjct 103160 TGGAGAACATCCACTCCGAGACCTACTC---GCTGCTCATCGACACCTACATCAAGGAGC 103216
Query 42592 CCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGAC 42628
| | | |||| | || ||||| ||||| || ||
Sbjct 103217 CTGCCCAGCGCACGTACCTCTTCAACGCCATTGACAC 103253
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944326852764960
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