Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001625265.1_202016-
04-19] 1,046 sequences; 52,836,184 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq82 273 3e-68
>seq82
Length=153332
Score = 273 bits (302), Expect = 3e-68
Identities = 1172/1832 (64%), Gaps = 43/1832 (2%)
Strand=Plus/Minus
Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585
||||||||||||| || |||| | || ||||||||||| |||||||| || |
Sbjct 73136 TGAACTGAATGGGAGCAGCAGCAGCCTGCGTGCGCAGGTAGTACATGCCCGTCTTCAGGC 73077
Query 115586 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 115645
| |||||||| | | |||||| || | |||| | || || | ||||
Sbjct 73076 CGAGCTTCCAGCCGGCGAAATGCATGCTGGTTATCTTGCCCATGGTCGGGTCCTTCATGT 73017
Query 115646 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 115705
| ||| | || || || ||||||||| || || || || ||||| | | |
Sbjct 73016 GAATGTTGAGCGACTGCGACTGGTCGATGAAGGCACCACGGTCGGCAGCCATCTGCACAA 72957
Query 115706 CATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATAT 115765
|| | | ||| ||||| ||||| |||| ||| ||| | ||| || || |
Sbjct 72956 CAGTACGCTGCGAGATCTCCCAAACAGTCTTGTACAGGGCCTTGACCTCAGTAGGAATGT 72897
Query 115766 CCACGATATTTTGGATAGAGCCACCTGCCTTGACCATGA---GATCCTTCATATCCTTTG 115822
||| || ||||| || ||| || | | |||| | | |||||| | | |
Sbjct 72896 TGGGGATGTTCTGGATGGA---ACCGTTCTCGGCAATGATGCGGTTCTTCATGGCATCGG 72840
Query 115823 ACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTTATTGACAACAACAAACTCAC 115882
|||| ||||| || | |||||||| || ||| |||||||| |||||||
Sbjct 72839 ACCACAGACCCATGTCGACGAGATCCTTCAAGAGCCAAGGGTTGACAACCTGGAACTCAC 72780
Query 115883 CCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTAC 115942
| || || || | | | |||||||||| ||||| |||||||||||||| ||||| |
Sbjct 72779 CAGCAAGAACACGACGCTGGTAGATGTTGGAGGTGTAGGGCTCAAAGCACTCGTTGTTGC 72720
Query 115943 CCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGAC 116002
||||||| || | ||| ||| || |||||||| || | |||||| |||||||| ||
Sbjct 72719 CCAAGATCTGCGAGGTGCTGGCAGTCGGCATGGGCGCGACGAGAAGAGAGTTGCGGACAC 72660
Query 116003 CCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCT 116062
| | | |||| | ||||| | || |||||||| || | | || | |
Sbjct 72659 CGTGCTGCTTAATCTGCTCCTTCAAAGCATCCCAGTCCCAGAGATCCGAGGGCTTGACAT 72600
Query 116063 CCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATG 116122
|||||| ||| |||||||||| || || || | || || ||||| | |||| || |
Sbjct 72599 TCCACATGTCATACTGGAGGATGCCCTGAGAAACAGGGGAACCCTCGTACGTCTGGTAGG 72540
Query 116123 GGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCT 116179
||||||| ||| |||| | | || | | |||||| ||||| || || ||||
Sbjct 72539 GGCCCTCCTCCTTGGCCAGCTGCACCGACATGGT---GAGGGCAGCGTGGTAGATGGTCT 72483
Query 116180 CAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAA 116239
| || || || | | |||||| || || || | | |||| |
Sbjct 72482 CGAAGATCTTCTTGTTGAGGTCGCGAGCCTCGGGAGACTCGAAGGGCATACGGAGAGCCA 72423
Query 116240 TAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACT 116299
|| |||| || ||||| ||||||||||| || || ||||| || | ||| || |
Sbjct 72422 GGAAGGCATCAGCAAGACCCTGGACACCGAGACCGATGGGGCGGTGGCGCATGTTGCTGT 72363
Query 116300 TTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGA 116359
| ||||| || || || || || ||||| | || || || || | |
Sbjct 72362 TGCGAGCCTCCTGAACAGGGTAGTGGTTGACGTCGATGATTCTGTTCAGGTTGCGGACAA 72303
Query 116360 CAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA-ACTGCGAGTCTCTTCATTG--- 116415
| |||| |||| || || ||||| | | | || | ||| | ||| | | |
Sbjct 72302 CGACCTGGGTGACCTCGTGGAGCTTCTGGAAGTCGTAGACTCC----CTCGTTGTAGTCA 72247
Query 116416 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 116475
||| | | || ||||||| || ||||| || || |||| | |||||| | |
Sbjct 72246 ACAAAGGTGGGCAGGGCGAGCGAGGCCAGGTTGCAGACAGCGACCTCATCAGGCGCGCAG 72187
Query 116476 TACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 116535
||||| ||||| ||||| || | || || || || ||||| | |||||| || ||
Sbjct 72186 TACTCGATAATCTCCGTGCAGAGGTTGGAGCTGCGGATAGTGCCAAGGTTCTTCTGGTTG 72127
Query 116536 GACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGAC 116595
||| ||| ||||||||||||||||| | || | || ||||| || |||| |
Sbjct 72126 CTCTTGCGGTTGGCGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCC 72067
Query 116596 TTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGG----CTCGCCCCT 116650
| ||| || || | ||| | | || | | || || ||| ||| || |||| |
Sbjct 72066 TCGAGGATGGCATACCAGAGCTTCTGAGCCTT---CA-TGGTCTTGCGACCCTTGCCCAT 72011
Query 116651 CCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCC-TCTGAGAGCCCT 116709
| | ||||||||| ||| | |||||||||||| || || ||| || | || ||
Sbjct 72010 C-TGCTCGTACTTCTCGTACAAGGCCTCAAACTCCTCGCCGT-AGCAGTCGGCCAGGCCA 71953
Query 116710 GGTGCCTTATCTGGA-CAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAA 116768
|| || || ||| || | ||||| ||| | ||| || ||| |||| |||||||||
Sbjct 71952 GG-GCATTCGTTGGGGCACATGAGAGTCCAGTCCCCATTCTTCTCCACCCTCTTCATGAA 71894
Query 116769 GAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTG 116828
|||||| || |||||||| || ||| || || || |||| | || || | || ||
Sbjct 71893 GAGGTCGGGAATCCAGAGGGCGAGGAAAAGGTCACGGGCGCGAACCTCCTCCTTGCCGTG 71834
Query 116829 ATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGC 116888
|| ||||| ||||| ||||| | || ||| |||||||| || || ||||| | ||
Sbjct 71833 GTTCTTGCGCAAATCCAAGAAGTCGAAGACATCGGCGTGCCAAGGCTCAAGGTAAATGGC 71774
Query 116889 GATTGACCCCTTGCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATAC 116945
|| | || ||| ||| |||||| || || | || || ||| || ||
Sbjct 71773 GAAAGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCAGTGTTGTTGAAGAC 71714
Query 116946 GCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTT 117005
|| ||||| || | || ||| | || || || || || |||| || | |
Sbjct 71713 ACGGAGCATAGGGACGACACCGTTGGAGGTACCGTTCGTGCCGGCAATATATGAGCCGGT 71654
Query 117006 GGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCA 117065
||| | || ||||| || | |||||| || || ||| ||| ||||| |||||
Sbjct 71653 GGCGCGGATGCGGTGGACGTTGAGACCAATGCCACCGGCCATCTTGGAGATCATGGCGCA 71594
Query 117066 CTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCA 117125
| |||| || | ||||| || || || ||||| |||| | ||| |||||||||
Sbjct 71593 AGTCTTGAGGGTGTCATAGATACCCTCAATAGAGTCCTCCTTCATGTCGACGAGGAAGCA 71534
Query 117126 GCTCGACATTTGTGGCCT-TGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGA 117184
|||| || ||||| || ||||| ||||||||||| || || | ||||| |||
Sbjct 71533 AGAGGACAGCTG-GGCCTGAGGGGTACCGGCGTTGAAGAGTGTGGGAGAGGCGTGAGTGA 71475
Query 117185 ACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTG 117242
| | |||| |||||| | |||||| || | ||| || ||| || ||
Sbjct 71474 --AGAACTTGCTCGACATCAGGTTGTAGGTTTCGATGACGCGCTCAACGTCGTCACCCCA 71417
Query 117243 AATACCGATTGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAG 117302
||||| | | ||| ||||| | ||||| |||||| | || | | || || ||
Sbjct 71416 GATACCAACGGCGACACGCATGATCATGTGCTGGGGTCTCTCGGCAATCTTGCCGTCAAG 71357
Query 117303 CCTCTGGAGGTAACTCTTCTCCAAGGTCTTGA 117334
| | ||||||| ||||||| |||||||
Sbjct 71356 CTTGAGGAGGTATGATCTCTCCAAAGTCTTGA 71325
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613499178393360
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