Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001625265.1_202016-
04-19] 1,046 sequences; 52,836,184 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq82 271 9e-68
seq377 100 3e-16
>seq82
Length=153332
Score = 271 bits (300), Expect = 9e-68
Identities = 1128/1754 (64%), Gaps = 57/1754 (3%)
Strand=Plus/Minus
Query 109399 GCCTTCGAGCGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGC 109458
|||| || ||| || || ||||| ||||| || || || |||||| || | ||||
Sbjct 73113 GCCTGCGTGCGCAGGTAGTACATGCCCGTCTTCAGGCCGAGCTTCCAGCCGGCGAAATGC 73054
Query 109459 ATTGAAGAGAGTTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGA 109518
|| | | ||| | ||||| || ||| | ||| | |||||| |||||
Sbjct 73053 ATGCTGGTTATCTTGCCCATGGTCGGGTCCTTCATGTGAATGTTGAGCGACTGCGACTGG 72994
Query 109519 TCGATGAATCGACCACGATCAGCCGCCATGTCGATGA---TACACTTTTGGCTA-ATTTC 109574
|||||||| |||||| || || ||||| | | | ||| || || | || ||
Sbjct 72993 TCGATGAAGGCACCACGGTCGGCAGCCATCTGCACAACAGTACGCT----GCGAGATCTC 72938
Query 109575 CCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGA 109634
||| ||||||||||||| ||||| ||| ||||||| |||||| || || ||
Sbjct 72937 CCAAACAGTCTTGTACAGGGCCTTGACCTCAGTAGGAATGTTGGGGATGTTCTGGATGGA 72878
Query 109635 GCCACCAGCCTTCACCATGA---GATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTT 109691
||| || | |||| | | |||||| | | ||||| ||||| | |
Sbjct 72877 ---ACCGTTCTCGGCAATGATGCGGTTCTTCATGGCATCGGACCACAGACCCATGTCGAC 72821
Query 109692 GAGATCGTCAACAAGATGCTTG--TTGACCACGACAAATTCACCAGCAAGTGTGCGTCGG 109749
|||||| | ||||| | | ||||| || || ||||||||||| || ||
Sbjct 72820 GAGATCCTT--CAAGAGCCAAGGGTTGACAACCTGGAACTCACCAGCAAGAACACGACGC 72763
Query 109750 AGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTG 109809
|||||||||| | |||||||| || || ||||| |||||||| | ||| || | |||
Sbjct 72762 TGGTAGATGTTGGAGGTGTAGGGCTCAAAGCACTCGTTGTTGCCCAAGATCTGCGAGGTG 72703
Query 109810 GAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGC 109869
|| || |||||||| || | ||||||| ||| |||| ||| | | ||| | | ||
Sbjct 72702 CTGGCAGTCGGCATGGGCGCGACGAGAAGAGAGTTGCGGACACCGTGCTGCTTAATCTGC 72643
Query 109870 TCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCT 109929
|| || || ||||| || | || | | | | || ||| |||||| ||
Sbjct 72642 TCCTTCAAAGCATCCCAGTCCCAGAGATC-CGAG-----GGCTTGACATTCCACATGTCA 72589
Query 109930 GGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACC 109989
|| || | |||| || | |||| ||||||| | | ||| ||| | ||||| ||
Sbjct 72588 TACTGGAGGATGCCCTGAGAAACAGGGGAACCCTCGTACGTCTGGTAGGGGCCCTCCTCC 72529
Query 109990 TCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCA 110049
| ||||| || || || || || || || || ||||| || || |
Sbjct 72528 TTGGCCAGCTGCACCGACATGGTGAGGGCAGCGTGGTAGATGGTCTCGAAGATCTTCTTG 72469
Query 110050 TTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAACACATCCGCT 110109
|| | | ||||| ||| | | |||||||| | || | | || |||| ||
Sbjct 72468 TTGAGGTCGCGAGCCTCGGGAGACTCGAAGGGCATACGGAGAGCCAGGAAGGCATCAGCA 72409
Query 110110 AGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCT 110169
|||||||| ||||||||||| |||||||| || |||||| | ||||| |
Sbjct 72408 AGACCCTGGACACCGAGACCGATGGGGCGGTGGCGCATGTTGCTGTTGCGAGCCTCCTGA 72349
Query 110170 ACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATT 110229
|| ||||| |||| |||||||| | || || || || || ||||
Sbjct 72348 ACAGGGTAGTGGTTGACGTCGATGATTCTGTTCAGGTTGCGGACAACGACCTGGGTGACC 72289
Query 110230 TCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTG---ACATATTTGGGGAGA 110286
|| ||||| || | | | ||| | | | | ||| || | | ||| | |||| ||
Sbjct 72288 TCGTGGAGCTTCTGGAAGTCGTA-GACTCC--CTCGTTGTAGTCAACAAAGGTGGGCAGG 72232
Query 110287 GCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCC 110346
|| | || || || ||||| |||| ||| || || ||| || | ||| |||
Sbjct 72231 GCGAGCGAGGCCAGGTTGCAGACAGCGACCTCATCAGGCGCGCAGTACTCGATAATCTCC 72172
Query 110347 GTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCAT 110406
|| || | |||||| || || || | ||||||||| || ||| ||||
Sbjct 72171 GTGCAGAGGTTGGAGCTGCGGATAGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGGCG 72112
Query 110407 GCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTC 110466
|||||||| ||||||||| | ||| ||||||| || ||||| | || ||| ||||| | |
Sbjct 72111 GCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCGAGGATGGCATAC 72052
Query 110467 CATA-CATCGGCGGCGG---GGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGT 110522
|| | | || | | | || | ||||| | | || || | |||||||||
Sbjct 72051 CAGAGCTTCTGAGCCTTCATGGTC--TTGCGACC-CTTGCCCATC-TGCTCGTACTTCTC 71996
Query 110523 GTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTT-GTCGGGAC 110581
||||||| ||||||| |||| ||||| || | || || || || || ||| |
Sbjct 71995 GTACAAGGCCTCAAACTCCTCGCCGTAGCAGTCGGCCAGGCCAGG-GCATTCGTTGGGGC 71937
Query 110582 AGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACA 110641
| | ||| | ||| | ||| || ||| |||||||||||||| ||||| |||||||| |
Sbjct 71936 ACATGAGAGTCCAGTCCCCATTCTTCTCCACCCTCTTCATGAAGAGGTCGGGAATCCAGA 71877
Query 110642 TCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCA 110701
|| ||||||||||||| ||| |||| || | || ||||| ||| | ||||
Sbjct 71876 GGGCGAGGAAAAGGTCACGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGCAAATCCA 71817
Query 110702 AAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATA------GACAGCGATGGATCCCT 110755
| ||||| | || ||| | |||||| || || || || || ||| || | ||
Sbjct 71816 AGAAGTCGAAGACATCGGCGTGCCAAGGCTCAAGGTAAATGGCGAAAGCACCGGGGCGCT 71757
Query 110756 TACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAA 110815
| | | || |||||| || ||||| || ||| |||||||| | ||||||||| |
Sbjct 71756 T--GTTG-CCACCCTGGTCGACGTAGCGAGCAGTGTTGTTGAAGACACGGAGCATAGGGA 71700
Query 110816 TAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGT 110875
| || | ||| ||| || || || ||| || |||| || ||| ||
Sbjct 71699 CGACACCGTTGGAGGTACCGTTCGTGCCGGCAATATATGAGCCGGTGGCGCGGATGCGGT 71640
Query 110876 GGATATGCATACCAATACCACCCGCCCACTTACTAAT--TTGTGCACACTCTGTGAGTGT 110933
||| | | |||||| ||||| ||| ||| || | | ||| | ||| |||| ||
Sbjct 71639 GGACGTTGAGACCAATGCCACCGGCCATCTTGGAGATCATGGCGCA-AGTCT-TGAGGGT 71582
Query 110934 ACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTG 110993
|||| ||||| ||||| || || |||| || | | || |||||||| |||| |||
Sbjct 71581 GTCATAGATACCCTCAATAGAGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGACAGCTG 71522
Query 110994 AGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTG--G 111051
| |||| || || || ||||||||||| || | || ||| ||| ||| ||||
Sbjct 71521 GGCCTGAGGGGTACCGGCGTTGAAGAGTGTGGGAGAGGCGTGAGTGA--AGAACTTGCTC 71464
Query 111052 GACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCA 111111
|||||| |||||| || |||| || || || | ||| ||||||| |||
Sbjct 71463 GACATCAGGTTGTAGGTTTCGATGACGCGCTCAACGTCGTCACCCCAGATACCAACGGCG 71404
Query 111112 ACTCGCATGAACAT 111125
|| ||||||| |||
Sbjct 71403 ACACGCATGATCAT 71390
>seq377
Length=104763
Score = 100 bits (110), Expect = 3e-16
Identities = 329/505 (65%), Gaps = 25/505 (5%)
Strand=Plus/Plus
Query 11506 TCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCGGCA 11565
|||||||| || || || | ||||| | || ||||| ||| | | ||| || | ||
Sbjct 62497 TCGAAACGGCCGGGACGCATCAGAGCCTTGTCGAGAATGTCGGCTCTGTTGGTGCCCGCG 62556
Query 11566 ATGACTACAATGCCAGTCTCAT---TGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTG 11622
| || || | || | ||| | ||| |||||||||||| || ||||| | ||||||
Sbjct 62557 AGCACAACCA--CCTG-CTCCTGGGTGTTGAAACCGTCCATCTCGGTGAGGATCTGGTTC 62613
Query 11623 ATCGTCTGTTCACGCTCATCGTTGGAGGGCATAC-------CACCTGCC--GAACGCTTC 11673
| || || ||||| |||||| | ||| | | |||| | || ||
Sbjct 62614 AGGGTAGCCTCGCGCTCGTCGTTGCCGCCCATGCGGTTGCCCTCCTGTCTCGATCG---- 62669
Query 11674 TTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGT 11733
||| | ||||| ||||| || ||||| | || || || ||| || ||| |
Sbjct 62670 --ACCAATGGCGTCGATCTCGTCAATGAAGATAATGCAAGGGGCGTTCTTCCGCGCCGTT 62727
Query 11734 TCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG-- 11791
|||| || || || || | | |||||||| ||||||||||| ||||| | |
Sbjct 62728 GCGAACAGGTCGCGCACTCTGGAAGGACCAACACCGACGAACATCTCGACGAACTCGGAA 62787
Query 11792 CGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAG 11851
| || || | ||||| |||||| || ||||| ||||| |||| || || || |
Sbjct 62788 CCGCTGA-CGCTGAA-GAAGGGCACGCCGGACTCGCCAGCAGTGGCCTTGGCAAGCAGCG 62845
Query 11852 TCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTC 11911
||||||| || || || | ||||| || | || || ||||||||||||||||| |
Sbjct 62846 TCTTACCGGTTCCGGGAGGTCCAGCCAGGATAGCACCGCGGGGGATCTTGGCACCTAACC 62905
Query 11912 CAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGG 11971
| ||||||| || |||| | |||| || | |||| | ||| ||||||
Sbjct 62906 GCTCGAAGCGCTCGGGGGTCTTCAAGAAGCTGACGAACTCCATGATCTCCGTCTTGGCCT 62965
Query 11972 AGTCGATACCCTCAACATCGGTGAA 11996
||| || || |||| ||| ||||
Sbjct 62966 CGTCCATGCCGGCAACGTCGCTGAA 62990
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588968299138800
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