Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001625265.1_202016-
04-19] 1,046 sequences; 52,836,184 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq82 383 3e-101
seq268 154 3e-32
>seq82
Length=153332
Score = 383 bits (424), Expect = 3e-101
Identities = 1066/1607 (66%), Gaps = 96/1607 (6%)
Strand=Plus/Minus
Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612
|| || ||||| | ||| |||||||||||| ||||| || ||||||||||| |||||
Sbjct 73140 ACGGTGAACTGAATGGGAGCAGCAGCAGCCTGCGTGCGCAGGTAGTACATGCCCGTCTTC 73081
Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTGTGAGTT-TCTTCAGCTTAATATT 212668
||||| ||| ||||||| | ||||| |||| ||| |||| | || |
Sbjct 73080 AGGCCGAGCTT---CCAGCCGGCGAAATGCAT-GCTG---GTTATCTTGCCC---ATGGT 73031
Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728
| |||| | || || || | ||| || ||||| |||||| ||||| | |
Sbjct 73030 CGGGTCCT--TCATG-------TGAATGTTGAGCGACTGCGACTGGTCGATGAAGGCACC 72980
Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788
| ||| || ||||| | | | | | ||| |||| |||||| || |||||| | |
Sbjct 72979 ACGGTCGGCAGCCATCTGCACAACAGTACGCTGCGAGATCTCCCAAACAGTCTTGTACAG 72920
Query 212789 TTCTTTGAGGTCCTCTG--GGAA-GCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGT 212845
| |||| |||| | |||| | |||||||||||| | || || || | | |
Sbjct 72919 GGCCTTGA---CCTCAGTAGGAATGTTGGGGATGTTCTGGATGGAACC---GT-TCTCGG 72867
Query 212846 CA--GCTGCAGGCG--CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCA 212901
|| | ||| | |||| | ||| ||| || ||| || | || ||| | |
Sbjct 72866 CAATGATGCGGTTCTTCATGGCATCGGACCACAGACCCATGTCGACGAGATCCTTCAAGA 72807
Query 212902 GGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAG 212961
| ||||||||| | |||||| ||||| | || || | | |||||| | ||| || |
Sbjct 72806 GCCAAGGGTTGACAACCTGGAACTCACCAGCAAGAACACGACGCTGGTAGATGTTGGAGG 72747
Query 212962 TGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGG 213021
|||||||||| | || ||||||||| |||| ||||| | |||||||| || |||||||
Sbjct 72746 TGTAGGGCTCAAAGCACTCGTTGTTGCCCAAGATCTGCGAGGTGCTGGCAGTCGGCATGG 72687
Query 213022 GAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCG---AAGCTCTG 213078
| || || || ||| ||| | || ||||||| || | || || ||||
Sbjct 72686 GCGCGACGAGAAGAGAGTTGCGGACACCGTGCT-GCTTAATCTGCTCCTTCAAAGCAT-- 72630
Query 213079 CCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGA 213138
|||||||||| || ||| | ||| || |||||||||||| |||| | ||
Sbjct 72629 CCCAGTCCCAG---------AGATCCGAGGGCTTGACATTCCACATGTCATACTGGAGGA 72579
Query 213139 TGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCT 213198
|||| | || ||| |||| ||| | ||||||||| | ||||||||||||||
Sbjct 72578 TGCCCTGAGAAACAGGGGAACCCTCGTACGTCTGGTAGGGGCCCTCCTCCTTGGCCAGCT 72519
Query 213199 CGCAG-GACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTC 213257
||| ||| |||||||||| ||||||||| || || |||| | ||||||| |
Sbjct 72518 -GCACCGACATGGTGAGGGCAGCGTGGTAGATGGTCTCGAAGATCTTCTTGTTGAGGTCG 72460
Query 213258 TTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGG 213317
||||| || ||| ||||||||| | |||| ||||||| || ||||||
Sbjct 72459 CGAGCCTCGGGAGACTCGAAGGGCATACGGAGAGCCAGGAAGGCATCAGCAAGACCCTGG 72400
Query 213318 ACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTA 213376
|| |||| |||||||| | ||| | || ||| ||| |||| ||||| | |||||
Sbjct 72399 ACACCGAGACCGATGGGGCGGTGGCGCATGTTGCTGTTGCGAGC-CTCCTGAACAGGGTA 72341
Query 213377 AAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAG 213436
|||| ||||||||| |||| ||||||||| | || | |||||| | | ||
Sbjct 72340 GTGGTTGACGTCGATGATTCTGTTCAGGTTGCGGACAACGACCTGGGTGACCTCGTGGAG 72281
Query 213437 GTACTCGTGATTGAACACGTAGCCCCCGTCCTGC------ACAAACTCAGGCAGGGCGAT 213490
| || | || ||||| | || || | ||||| ||||||||||
Sbjct 72280 CTTCTGG------AAGTCGTAGACTCCCTCGTTGTAGTCAACAAAGGTGGGCAGGGCGAG 72227
Query 213491 GCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCA 213550
|||||||||||| || || ||||| | || | |||||| || ||||| |||||
Sbjct 72226 CGAGGCCAGGTTGCAGACAGCGACCTCATCAGGCGCGCAGTACTCGATAATCTCCGTGCA 72167
Query 213551 CAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATC 213610
|||||| || ||||| ||||| ||||||| ||||| ||| |||||| | |||
Sbjct 72166 GAGGTTGGAGCTGCGGATAGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGGCGGCATC 72107
Query 213611 CTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCT--CCAG 213668
||||||||||||| ||||| || ||||| ||||| | | || || ||| ||||
Sbjct 72106 CTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCGAGGAT--GGCATACCAG 72049
Query 213669 AGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAG 213728
|| | | ||||| || | || | | | | | |||||||| |||||
Sbjct 72048 AGCTTCTGAGCCTT---CATGGTCTTGCGACCCTTGCCCATCTGCTCGTACTTCTCGTAC 71992
Query 213729 AGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATG 213788
| | | || || | ||| || | |||| || || || ||| ||||||
Sbjct 71991 AAGGCCTCAAACTCCTCGCCGTAGCAGTCGGCCAGGCCAGGGCATTCGTTGGGGCACATG 71932
Query 213789 AGGCTCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGC 213847
|| |||||||||| | | |||| || |||| |||||| ||||| || | ||| || ||
Sbjct 71931 AGAGTCCAGTCCCCATTCTTCTCC-ACCCTCTTCATGAAGAGGTCGGGAATCCAGAGGGC 71873
Query 213848 GGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAA 213907
| ||| ||||| | || | ||| ||| || ||| ||||||| ||| | ||
Sbjct 71872 GAGGAAAAGGTCACGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGCAAATCCAAGAA 71813
Query 213908 GTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG-- 213965
||| |||| || |||||||| ||||| | ||| ||||| || || || || | ||||
Sbjct 71812 GTCGAAGACATCGGCGTGCCAAGGCTCAAGGTAAATGGCGAAAGCACCGGGGCGCTTGTT 71753
Query 213966 -CCGCCCTGGTCCACCAGCCTGGCCACCA----TGTTGAAGATGCGCAGGACGGGTACCA 214020
|| |||||||| || | || | || ||||||||| || || | || || |
Sbjct 71752 GCCACCCTGGTCGACG----TAGCGAGCAGTGTTGTTGAAGACACGGAGCATAGGGACGA 71697
Query 214021 GCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCA 214080
|||||||| ||||| || || || ||||| ||||||| ||| | || |||
Sbjct 71696 CACCGTTGGAGGTACCGTTCGTGCCGGCAATATATGAGCCGGTGGCGC---GGATGCGG- 71641
Query 214081 TGGA----GAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCA 214123
|||| ||| || ||||||||||| ||||||||||||||||||
Sbjct 71640 TGGACGTTGAGACCAATGCCACCGGCCATCTTGGAGATCATGGCGCA 71594
>seq268
Length=131150
Score = 154 bits (170), Expect = 3e-32
Identities = 348/517 (67%), Gaps = 11/517 (2%)
Strand=Plus/Minus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| | || | |||||||||||||| ||||| || ||| |||||||||||
Sbjct 103827 CTGGTAGTCGGCAACACGCTTCTCAAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTCTC 103768
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957
||||||| |||||||||| | || || ||| ||||| ||| | ||| |
Sbjct 103767 CATGAAGTCAAAGGGGTTGGAAGACTTGTAGACCT-TGTCATTGCCGAGAGCAACCAAGA 103709
Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017
|| | || || || |||| ||||| | ||| ||| || ||||||||| | || |
Sbjct 103708 GGCGGTCGGCAACAAACTCAATGTACTGCTTCATCAGGTTGGAGTTCATGCCGAGCAGAG 103649
Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077
|||| ||||| || || ||||||| ||| |||| || || || | | || |
Sbjct 103648 CGCAAGGCAGAGCCTCGGTCAGGAACTCCTGCTCAATCTTGACAGCATCGACGATGATGT 103589
Query 48078 GCTTAACGCGGGACT--CTGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGG 48134
|| || | || ||| || | || ||| ||||| | ||||| | |||||
Sbjct 103588 CCTCAATGACCTGCTTGCTGGGGCGGTTCTTG---AGGTGAGAG---TAGAGGAGGCAGG 103535
Query 48135 CAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAG 48194
| ||||| |||| | || || || || ||| ||| ||||||||||| ||||| |
Sbjct 103534 CGAAGTCGGTGTGAAGACCCTCATCACGAGAGATCAGCTCGTTGGAGAAGGTCAGACCGG 103475
Query 48195 GCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGC 48254
|||| | || | || ||||||||||| || | ||||| | || ||||||||| |
Sbjct 103474 GCATAAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATAC 103415
Query 48255 CCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCC 48314
|||| || || ||||| || ||| | || |||| || | |||| || ||||
Sbjct 103414 CCTCAACGGCGGCGAAGGCAACGAGACGCTGGGCGAAGGAGGACTTCTCATCGCTAATCC 103355
Query 48315 AGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351
| || |||||||| |||||||| |||||| ||
Sbjct 103354 ACTTCAGGGCCCAGTCGGCCTTCTTGCGGATGCAGGG 103318
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931520620208640
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