Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001625265.1_202016-
04-19] 1,046 sequences; 52,836,184 total letters
Query= NC_019721.1
Length=40029
Score E
Sequences producing significant alignments: (Bits) Value
seq955 266 8e-67
>seq955
Length=418
Score = 266 bits (294), Expect = 8e-67
Identities = 253/321 (79%), Gaps = 2/321 (1%)
Strand=Plus/Minus
Query 4805 TCCTGAACCCGCGGGACTGGCACAACATCGCGCTGCTGAAAGACAATGAAGGCCGCTATA 4864
||||||||||||| ||||||||| |||||| ||||| ||||| || || ||||||
Sbjct 407 TCCTGAACCCGCGTGACTGGCACGCCATCGCACTGCTAAAAGATTCGGATGGTCGCTATC 348
Query 4865 TCTTCGGTGGTCCTCAGGCGTTTACCAGCAACA-TCATGTGGGGCCTGCCAGTGGTTCCG 4923
| |||||||| || |||||| || |||| | |||||||||||||||| || || |
Sbjct 347 TGTTCGGTGGCCCGGCGGCGTTCGCC-GCAAAAGTCATGTGGGGCCTGCCGGTTGTGGCC 289
Query 4924 ACTAAGGCGCAGGCCGCCGGCACCTTTACGGTGGGCGGTTTCGATATGGCCTCTCAGGTC 4983
|| ||||| ||||| |||||||| || || ||||||||||| |||| || ||| ||
Sbjct 288 ACCAAGGCCCAGGCGCAAGGCACCTTCACCGTCGGCGGTTTCGACCTGGCATCGCAGATC 229
Query 4984 TGGGATCGCATGAATGCCACCGTGGAAGTCAGCCGTGACGACCGCGACAACTTCGTGAAA 5043
||||| |||||| | || ||| | || ||||| | | || |||||||||||||||||
Sbjct 228 TGGGACCGCATGGACGCGACCATCGAGATCAGCAATCAGGATCGCGACAACTTCGTGAAG 169
Query 5044 AACATGCTGACCATTCTGTGCGAAGAGCGCCTGGCGCTGGCGCACTATCGCCCGGCGGCC 5103
|||||||||||||| ||||| |||||||| |||||| || | ||||| || ||| | ||
Sbjct 168 AACATGCTGACCATCCTGTGTGAAGAGCGTCTGGCGGTGACCCACTACCGTCCGACCGCG 109
Query 5104 ATCATCAAGGGCACTTTCTCT 5124
|| ||||||||||||||| ||
Sbjct 108 ATGATCAAGGGCACTTTCACT 88
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127969610437732
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |