Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001625265.1_202016-
04-19] 1,046 sequences; 52,836,184 total letters
Query= NC_019934.1
Length=39012
Score E
Sequences producing significant alignments: (Bits) Value
seq955 266 8e-67
>seq955
Length=418
Score = 266 bits (294), Expect = 8e-67
Identities = 253/321 (79%), Gaps = 2/321 (1%)
Strand=Plus/Plus
Query 13441 AGAGAAACTGCCCTTGATGATTGCCGTCGGGCGATAGTGCGCCAGCGCCAGGCGCTCTTC 13500
|| |||| |||||||||| || || ||||| || ||||| | || |||||| ||||||||
Sbjct 88 AGTGAAAGTGCCCTTGATCATCGCGGTCGGACGGTAGTGGGTCACCGCCAGACGCTCTTC 147
Query 13501 ACACAGGATTGTCAGCATGTTTTTCACGAAGTTATCGCGGTCTTCACGGCTGACTTCCAC 13560
||||||||| ||||||||||| ||||||||||| ||||| || | | ||||| || |
Sbjct 148 ACACAGGATGGTCAGCATGTTCTTCACGAAGTTGTCGCGATCCTGATTGCTGATCTCGAT 207
Query 13561 GGTGGCATCCATGCGATCCCACACCTGCGAGGCCATATCAAAACCGCCCACCGTAAAGGT 13620
||| || |||||||| ||||| | |||||| |||| || |||||||| || || |||||
Sbjct 208 GGTCGCGTCCATGCGGTCCCAGATCTGCGATGCCAGGTCGAAACCGCCGACGGTGAAGGT 267
Query 13621 GCCAGCGGCCTGCGCCTTAGTCGGAACCACTGGCAGGCCCCACATGA-TGTTGCTGGTAA 13679
||| ||||| ||||| || | || || |||||||||||||||| | |||| || |
Sbjct 268 GCCTTGCGCCTGGGCCTTGGTGGCCACAACCGGCAGGCCCCACATGACTTTTGC-GGCGA 326
Query 13680 ACGCCTGAGGACCACCGAAGATATAGCGGCCTTCGTTGTCTTTCAGCAGCGCGATGTTGT 13739
||||| || |||||||| | |||||| || || ||||| ||||| |||||| ||
Sbjct 327 ACGCCGCCGGGCCACCGAACAGATAGCGACCATCCGAATCTTTTAGCAGTGCGATGGCGT 386
Query 13740 GCCAGTCGCGCGGGTTCAGGA 13760
||||||| |||||||||||||
Sbjct 387 GCCAGTCACGCGGGTTCAGGA 407
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 124715250861448
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |