Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001625265.1_202016-
04-19] 1,046 sequences; 52,836,184 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq82 86.0 5e-12
>seq82
Length=153332
Score = 86.0 bits (94), Expect = 5e-12
Identities = 150/218 (69%), Gaps = 3/218 (1%)
Strand=Plus/Minus
Query 130763 TGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGAT 130822
|| || |||||||| || || || | ||| |||||| ||| | || |||||| |
Sbjct 72789 TGGAACTCACCAGCAAGAACACGACGCTGGTAGATGTTGGAGGTGTAGGGCTCAAAGCAC 72730
Query 130823 TCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGAA 130882
||||||||||| || || || | || | || || |||||| || || | |||||
Sbjct 72729 TCGTTGTTGCCCAAGATCTGCGAGGTGCTGGCAGTCGGCATGGGCGCGACGAGAAGAGAG 72670
Query 130883 TTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGAGGTA 130942
|| || | ||||||| | | || | |||||| ||||||| ||||| ||| |
Sbjct 72669 TTGCGGACACCGTGCTGCTTAATCTGCTCCTTCAAAGCATCCCAGTCCCAGAGATCCGAG 72610
Query 130943 GGTTTGACATTGTTCCACATATCAAATTGTAGTATGCC 130980
|| |||||| |||||||| ||| | || || |||||
Sbjct 72609 GGCTTGACA---TTCCACATGTCATACTGGAGGATGCC 72575
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424928982883152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |