Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryphonectria_20radicalis_20[genbank_20GCA_5F002179595.1_202017-06- 08] 2,318 sequences; 41,022,676 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1567 82.4 8e-11 >seq1567 Length=91444 Score = 82.4 bits (90), Expect = 8e-11 Identities = 131/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 ||||| || ||||| || ||| ||| | |||||||| ||||||||||| |||| Sbjct 44974 ATATAGGTGTCGATCAGGAGGGAGTATGTCTCGGAGTGGATGTTCTCCATCATGGTCTGG 44915 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| ||||| ||||| || | || ||||| || || ||| || || | Sbjct 44914 AAGCCGTAGAAGCAACGGGCCTCAGGAATCTGAACCTCAGCGCTGAAGCGCTCGATCAAG 44855 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 || ||||| || |||||||| ||||| || || || | || || ||||| ||| Sbjct 44854 TTCTCGTTGACAATGCCGTCCGAGGCGGCAAAGAAGGCGAGGATGTGGGAGATGAAGTAT 44795 Query 17414 TTTTCGTC 17421 || ||||| Sbjct 44794 TTCTCGTC 44787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517530604116240