Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryphonectria_20radicalis_20[genbank_20GCA_5F002179595.1_202017-06-
08] 2,318 sequences; 41,022,676 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq813 251 8e-62
>seq813
Length=186750
Score = 251 bits (278), Expect = 8e-62
Identities = 524/783 (67%), Gaps = 63/783 (8%)
Strand=Plus/Plus
Query 145540 ACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCC 145599
|||| ||||| ||||| ||||| | ||| |||| || |||| || | ||||||||||
Sbjct 155251 ACCGACATCTTCATGGCGATGGTCTTGTGCGGGTCATAACCCTTCACCACAAAGTCCTCG 155310
Query 145600 GCCCTGAA---GTCAT--CTATGTCCTC-CACCCGCCTCAGGATCCTGAGCCTGGGAAAG 145653
|| | | |||| ||| |||| | ||||| |||| ||| |||||||
Sbjct 155311 ACCTTCCACCCGTCAATACTACCGCCTCTCTGGCGCCT---GATCTCCAGCTCGGGAAAG 155367
Query 145654 GGCCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGC 145713
|| || ||| |||||| | | || | || ||||||| | |||||| |||
Sbjct 155368 TCGCGCGGCTCCCTCTCCAGCTGTGTCCTGAGCGCGTCGACGTGGTCCACGTAGACATGC 155427
Query 145714 GCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATG 145773
||||| |||| |||||| | | | || ||| |||| | | ||| |||| ||||
Sbjct 155428 GCGTCGCCCATGACGTGCGTCAGGCTGCCCGGCACGAGATCACACACGTGCGCGATCATG 155487
Query 145774 TAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAG 145833
| |||||||| | ||||||||| |||||||| ||||| || || |||||||| | ||
Sbjct 155488 TGTGTCAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCGAGGCCCATGTCGCAGGAC 155547
Query 145834 CGCTGGTACAGCTGGCAGGAGAGCT----------------------------------- 145858
|||||||||||||||||| || |
Sbjct 155548 CGCTGGTACAGCTGGCAGTGCAGGTGGCCCTTGGGCTTCGCCTCGCCATCCCCGCTGTCC 155607
Query 145859 --CCCCGCCCGCC-----------ACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAG 145904
||||||| ||| ||||||||||| ||| | | ||| |||||||||||
Sbjct 155608 TGCCCCGCCGGCCGTGGATACGATACGTAGAACTGCGCA-AACATGTGACAGGGCGGCAG 155666
Query 145905 GGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGG 145964
|||||| |||||| |||||||| ||| | | || || | || | | ||
Sbjct 155667 CGCCATGATCTTCAGGTCTTTGGGGTTCCACGCGCTCATGATGATGCGCCGGTCGTACGG 155726
Query 145965 GTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATC 146024
|||| || ||| || ||| | ||| |||||||| |||||||| ||| ||| ||
Sbjct 155727 GTTCGTCCTGAGCTTGTGTATGACCTCCGCCAGCTGGTCGACGCCCTGGCCCGTGTAGTC 155786
Query 146025 TGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCC 146084
||| | | |||||||||| ||||||| ||||| | ||||||||| ||||| ||||| ||
Sbjct 155787 CGTCCTCGCGTCCACGTACTCGGCCCCAAAGTGGCGCCACTGGAAGCCGTACACGGGGCC 155846
Query 146085 CAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTT 146144
||||| || ||| | |||| || || | | | | ||||| || || ||||||||
Sbjct 155847 GAGGTCGCCCACCTCGCGGTGCGAGAGGCCCACGCCGTCCAGGAACTCGCGCGACCCGTT 155906
Query 146145 GGCGTCCCAGATCTTGACGCCC--CTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTG 146202
| |||||||||||||||||||| ||||| ||| | || ||| ||| | ||| |
Sbjct 155907 GCCGTCCCAGATCTTGACGCCCTGCTCGCTGAG-GGACA-GGGACGACGTCGCGCCCGAG 155964
Query 146203 ATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGG 146262
| ||||||||| ||||| |||||||| || | ||| || | ||||||||| || ||
Sbjct 155965 ACGAACCAGAGGAGCTCGGCGAGGACCGCCTTGTGGAACACGCGCTTGGTGGTGAGGAGC 156024
Query 146263 GGG 146265
|||
Sbjct 156025 GGG 156027
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590059702524720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |