Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryphonectria_20radicalis_20[genbank_20GCA_5F002179595.1_202017-06- 08] 2,318 sequences; 41,022,676 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq813 251 8e-62 >seq813 Length=186750 Score = 251 bits (278), Expect = 8e-62 Identities = 524/783 (67%), Gaps = 63/783 (8%) Strand=Plus/Plus Query 145540 ACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCC 145599 |||| ||||| ||||| ||||| | ||| |||| || |||| || | |||||||||| Sbjct 155251 ACCGACATCTTCATGGCGATGGTCTTGTGCGGGTCATAACCCTTCACCACAAAGTCCTCG 155310 Query 145600 GCCCTGAA---GTCAT--CTATGTCCTC-CACCCGCCTCAGGATCCTGAGCCTGGGAAAG 145653 || | | |||| ||| |||| | ||||| |||| ||| ||||||| Sbjct 155311 ACCTTCCACCCGTCAATACTACCGCCTCTCTGGCGCCT---GATCTCCAGCTCGGGAAAG 155367 Query 145654 GGCCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGC 145713 || || ||| |||||| | | || | || ||||||| | |||||| ||| Sbjct 155368 TCGCGCGGCTCCCTCTCCAGCTGTGTCCTGAGCGCGTCGACGTGGTCCACGTAGACATGC 155427 Query 145714 GCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATG 145773 ||||| |||| |||||| | | | || ||| |||| | | ||| |||| |||| Sbjct 155428 GCGTCGCCCATGACGTGCGTCAGGCTGCCCGGCACGAGATCACACACGTGCGCGATCATG 155487 Query 145774 TAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAG 145833 | |||||||| | ||||||||| |||||||| ||||| || || |||||||| | || Sbjct 155488 TGTGTCAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCGAGGCCCATGTCGCAGGAC 155547 Query 145834 CGCTGGTACAGCTGGCAGGAGAGCT----------------------------------- 145858 |||||||||||||||||| || | Sbjct 155548 CGCTGGTACAGCTGGCAGTGCAGGTGGCCCTTGGGCTTCGCCTCGCCATCCCCGCTGTCC 155607 Query 145859 --CCCCGCCCGCC-----------ACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAG 145904 ||||||| ||| ||||||||||| ||| | | ||| ||||||||||| Sbjct 155608 TGCCCCGCCGGCCGTGGATACGATACGTAGAACTGCGCA-AACATGTGACAGGGCGGCAG 155666 Query 145905 GGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGG 145964 |||||| |||||| |||||||| ||| | | || || | || | | || Sbjct 155667 CGCCATGATCTTCAGGTCTTTGGGGTTCCACGCGCTCATGATGATGCGCCGGTCGTACGG 155726 Query 145965 GTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATC 146024 |||| || ||| || ||| | ||| |||||||| |||||||| ||| ||| || Sbjct 155727 GTTCGTCCTGAGCTTGTGTATGACCTCCGCCAGCTGGTCGACGCCCTGGCCCGTGTAGTC 155786 Query 146025 TGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCC 146084 ||| | | |||||||||| ||||||| ||||| | ||||||||| ||||| ||||| || Sbjct 155787 CGTCCTCGCGTCCACGTACTCGGCCCCAAAGTGGCGCCACTGGAAGCCGTACACGGGGCC 155846 Query 146085 CAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTT 146144 ||||| || ||| | |||| || || | | | | ||||| || || |||||||| Sbjct 155847 GAGGTCGCCCACCTCGCGGTGCGAGAGGCCCACGCCGTCCAGGAACTCGCGCGACCCGTT 155906 Query 146145 GGCGTCCCAGATCTTGACGCCC--CTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTG 146202 | |||||||||||||||||||| ||||| ||| | || ||| ||| | ||| | Sbjct 155907 GCCGTCCCAGATCTTGACGCCCTGCTCGCTGAG-GGACA-GGGACGACGTCGCGCCCGAG 155964 Query 146203 ATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGG 146262 | ||||||||| ||||| |||||||| || | ||| || | ||||||||| || || Sbjct 155965 ACGAACCAGAGGAGCTCGGCGAGGACCGCCTTGTGGAACACGCGCTTGGTGGTGAGGAGC 156024 Query 146263 GGG 146265 ||| Sbjct 156025 GGG 156027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590059702524720