Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryphonectria_20radicalis_20[genbank_20GCA_5F002179595.1_202017-06-
08] 2,318 sequences; 41,022,676 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq1933 89.7 1e-12
>seq1933
Length=42650
Score = 89.7 bits (98), Expect = 1e-12
Identities = 111/153 (73%), Gaps = 12/153 (8%)
Strand=Plus/Plus
Query 94407 CTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAGGCCAGGGCA 94466
|||||| ||||||||||| |||| ||||| ||||| | | ||||| ||||| || ||
Sbjct 26421 CTCATACTTCTCGTACAAGGCCTCGAACTCCTCGCCGTAGCAGTCGGCCAGGCCGGGACA 26480
Query 94467 CTCGTGGGGGCACATCAGGGACCA------ATTCTTCCCAGCCTTCACTCTCTCCATGAA 94520
||||| ||||||||| |||| ||| ||||| || ||| | || ||||||
Sbjct 26481 CTCGTTGGGGCACATAAGGGTCCAGTCGCCGTTCTT------CTCCACACGCTTCATGAA 26534
Query 94521 GAGATCAGATACCCAGATAGCTGGGAAAAGATC 94553
|||||||| | ||||| || |||| || ||
Sbjct 26535 GAGATCAGGGATCCAGAGGGCCAGGAAGAGGTC 26567
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989554609973690
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |