Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryphonectria_20radicalis_20[genbank_20GCA_5F002179595.1_202017-06- 08] 2,318 sequences; 41,022,676 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1933 89.7 1e-12 >seq1933 Length=42650 Score = 89.7 bits (98), Expect = 1e-12 Identities = 111/153 (73%), Gaps = 12/153 (8%) Strand=Plus/Plus Query 94407 CTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAGGCCAGGGCA 94466 |||||| ||||||||||| |||| ||||| ||||| | | ||||| ||||| || || Sbjct 26421 CTCATACTTCTCGTACAAGGCCTCGAACTCCTCGCCGTAGCAGTCGGCCAGGCCGGGACA 26480 Query 94467 CTCGTGGGGGCACATCAGGGACCA------ATTCTTCCCAGCCTTCACTCTCTCCATGAA 94520 ||||| ||||||||| |||| ||| ||||| || ||| | || |||||| Sbjct 26481 CTCGTTGGGGCACATAAGGGTCCAGTCGCCGTTCTT------CTCCACACGCTTCATGAA 26534 Query 94521 GAGATCAGATACCCAGATAGCTGGGAAAAGATC 94553 |||||||| | ||||| || |||| || || Sbjct 26535 GAGATCAGGGATCCAGAGGGCCAGGAAGAGGTC 26567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989554609973690