Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryphonectria_20radicalis_20[genbank_20GCA_5F002179595.1_202017-06-
08] 2,318 sequences; 41,022,676 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq813 140 3e-28
>seq813
Length=186750
Score = 140 bits (154), Expect = 3e-28
Identities = 310/464 (67%), Gaps = 66/464 (14%)
Strand=Plus/Plus
Query 21000 ACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGG 21059
||||| ||||||| | ||||| || ||||||||||||||||| ||||| || ||||||
Sbjct 155473 ACGTGCGCGATCATGTGTGTCAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCGAGG 155532
Query 21060 CCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAG------------------CTC- 21100
||||||||| ||||| |||||||||||||||| ||| |||
Sbjct 155533 CCCATGTCGCAGGACCGCTGGTACAGCTGGCAGTGCAGGTGGCCCTTGGGCTTCGCCTCG 155592
Query 21101 ----CCCC-----CGAGCC--------------------ACGTAAAACTGACACAAA-AC 21130
|||| | ||| ||||| ||||| | |||| |
Sbjct 155593 CCATCCCCGCTGTCCTGCCCCGCCGGCCGTGGATACGATACGTAGAACTG-CGCAAACAT 155651
Query 21131 GTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCGCACATAACGAT 21190
|||||| || || || ||||| | ||||| |||||||||||||| ||| | |||
Sbjct 155652 GTGACAGGGCGGCAGCGCCATGATCTTCAGGTCTTTGGGGTTCCACGCGCTCATGATGAT 155711
Query 21191 GCGCCGATCGT--GGGGCCG-CCTG---TTAATTAGATCCACCACGTAACGCAGCTGGTC 21244
|||||| |||| ||| || |||| || || || || | |||||||||
Sbjct 155712 GCGCCGGTCGTACGGGTTCGTCCTGAGCTTGTGTATGACCTCCGC------CAGCTGGTC 155765
Query 21245 CACCCCCTGACCCTCGTAGT-TGGCGTCGGCCCCCCTGTACTCCGCCCCAAAATGTCTCC 21303
|| ||||| ||| ||||| | | || || || |||||| |||||||| || | ||
Sbjct 155766 GACGCCCTGGCCCGTGTAGTCCGTCCTC-GCGTCCACGTACTCGGCCCCAAAGTGGCGCC 155824
Query 21304 ACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTCCCCGAAGCCCTGCGCCG 21363
||||||| |||||||| || || || |||||| | ||||| | || |||| |||||
Sbjct 155825 ACTGGAAGCCGTACACGGGGCCGAGGTCGCCCACCTCGCGGTGCGAGAGGCCC-ACGCCG 155883
Query 21364 -CCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTACGCC 21406
||| || |||| ||||||| ||||||| || || |||||
Sbjct 155884 TCCAGGAACTCGCGCGACCCGTTGCCGTCCCAGATCTTGACGCC 155927
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427763915060640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |