Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryphonectria_20radicalis_20[genbank_20GCA_5F002179595.1_202017-06-
08] 2,318 sequences; 41,022,676 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq1852 104 4e-18
seq2009 98.7 2e-16
>seq1852
Length=52392
Score = 104 bits (114), Expect = 4e-18
Identities = 85/101 (84%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| || | ||| |||||| || |||||||| || ||||| ||||| || ||
Sbjct 5223 GCCAAGCGTCACCGAAAGAT-TCTTCGTGACAACATCCAGGGTATCACAAAGCCCGCCAT 5165
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| |||||||||||||| ||||||||| ||||||
Sbjct 5164 CCGCCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 5124
>seq2009
Length=25202
Score = 98.7 bits (108), Expect = 2e-16
Identities = 84/101 (83%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||| || || | ||| |||||| || |||||||| || || |||||||| || ||
Sbjct 8742 GCCAAGCGCCACCGAAAGAT-TCTTCGTGACAACATCCAGGGTATTACCAAGCCCGCCAT 8684
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| |||||||||||||| ||||||||| ||||||
Sbjct 8683 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 8643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79073080636374
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |