Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryphonectria_20radicalis_20[genbank_20GCA_5F002179595.1_202017-06-
08] 2,318 sequences; 41,022,676 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq1933 161 9e-35
seq757 134 1e-26
seq1543 132 5e-26
>seq1933
Length=42650
Score = 161 bits (178), Expect = 9e-35
Identities = 967/1532 (63%), Gaps = 30/1532 (2%)
Strand=Plus/Plus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
||||| ||||| ||||| || || | |||||| ||| || | ||| |||||| ||||
Sbjct 25627 TTGACCACCTGGAACTCACCAGCGAGCACACGCCGCTGGTAGATGTTGGACGTGTAGGGC 25686
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
||||| ||||||| ||||||||||| || | ||||| || |||||||| ||||| |
Sbjct 25687 TCAAAGCACTCGTTGTTGCCCAGGATCTGCGAGGTCGAGGCAGTGGGCATAGGCGCCATC 25746
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
|| || ||||| | ||| |||| |||||| | |||| || | |||| |||||
Sbjct 25747 AACAAGCTGTTGCGGACGCCATGCTGCTTGATCTTGGCCTTCAGGGCGTCCCAGTCCCAG 25806
Query 145238 AGCGAAGTCGGCCTCAC---GTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGG- 145293
|| | ||| | || |||||||||||||||||| | || |||| ||||
Sbjct 25807 AGGTCCGAGGGCTTGACGTTGTCCCACATGTCGTACTGAAGGATACCCTGAGAAACGGGA 25866
Query 145294 GCTGCCTTGAAAG-GAACT-GTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCC 145351
| | ||| | | | || | | || | || ||||| | ||||| ||
Sbjct 25867 GATCCCTCGTACGACAAGTAGGGACCGTCC---ACCTTGGCAATGTCGCACGATGCGGTG 25923
Query 145352 AGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTC 145411
|| ||| || || || ||||| || ||| |||| ||| | || ||| |
Sbjct 25924 AGGGCGGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTCAGCTGACGGGCCTCAGGCGAC 25983
Query 145412 TCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATG 145471
||| | |||| ||| || | || ||||| || || ||||| | |||||||||||
Sbjct 25984 TCGAAGGGCAGGCGGAGAGCCAAGAAGGCATCAGCCAGACCCTGAACGCCCACGCCGATA 26043
Query 145472 GGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATA 145531
|| || || ||||||||| | | ||| || || |||||| || ||||
Sbjct 26044 GGGCGGTGGCGCATGTTGCTGTTGCGAGCCTCCTGGACAGGATAGTAGTTGATATCGACG 26103
Query 145532 ATTTTATTCAAGTTTCGCACTACTACCTTTGTAA---TGTGCCGCAACTTTTCAAAGTCA 145588
|| || |||| ||| || || || || | || | |||| ||| | | ||||
Sbjct 26104 ATCTTGTTCAGGTTGCGGACGACAACTTGGGTGACTTCGTGCAGCAGC---TGGAAGTTG 26160
Query 145589 AACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACT 145648
| | | | ||| | | || | | | |||||| ||||||| || || ||
Sbjct 26161 TAGCAGTCGTTCTCATAGTCGACGAACTGAGGCAGGGCGATGGACGCCAGGTTGCAGACA 26220
Query 145649 GCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATG 145708
|| ||| || | | | ||| | | |||||| | ||| | ||| | ||||
Sbjct 26221 GCAACCTCGTCAGGGGCAGAGTACTCGATGATCTCCGTGCAGAGGTTGGAGCTGCGGATG 26280
Query 145709 GTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGT 145768
|| ||||| || | ||| || || || | |||| ||||||||| |||||| | ||
Sbjct 26281 GTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGGCGTGGTCCTTGTACAGCATGAATGGG 26340
Query 145769 CCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGCGCACGCACCTGC 145828
||| ||||| ||||| ||| | ||| | || | ||| || || |
Sbjct 26341 TTGCCGGTCTCGGTCTGCGCCTCGAGGATGGCATACCACAGCTTCTGTGCCTTCAAGGTC 26400
Query 145829 TGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAG 145888
| |||| ||| ||||| || || ||| ||| | |||| ||| | ||||||
Sbjct 26401 TTCTGGCCGCGACCCTCGCGCTCATACTTCTCGTACAAGGCCTCGAACTCCTCGCCGTAG 26460
Query 145889 CAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTTG 145948
|| |||| |||||||||||||| |||||| ||||| || | ||| ||||||| |
Sbjct 26461 CAGTCGGCCAGGCCGGGACACTCGTTGGGGCACATAAGGGTCCAGTCGCCGTTCTTCTCC 26520
Query 145949 ACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCAA 146008
|| |||| ||| || | ||| || | ||| || || | | ||| || || |
Sbjct 26521 ACACGCTTCATGAAGAGATCAGGGATCCAGAGGGCCAGGAAGAGGTCACGAGCACGGACC 26580
Query 146009 TCCTCAGCACCCATGTT-TCGCTTCAAATTAAGCACACT-ATAGATGTCCGCGTGCCACG 146066
|| || || ||| | || || | || | ||| ||| || ||||||||||
Sbjct 26581 TCTTCCTTTCCGTGGTTCTTGC-GCAGGTCGAGGA-ACTCGAAGACATCAGCGTGCCACG 26638
Query 146067 GTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGACGTA 146123
| || | |||| ||| | ||| || || |||||||||||||| |||| ||
Sbjct 26639 GCTCCAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAG 26698
Query 146124 CCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGTAGAGT 146183
| ||||||| ||||| |||| |||||| || ||| | | |||||| || |
Sbjct 26699 CAGTGTTGTTGAAGACACGCAGCATGGGGATGATGCCATTAGACGTGCCGTTGGTGCCGG 26758
Query 146184 TTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCCGCCGTACT 146243
|| || ||| || || | || || ||||| | || | || ||| | ||
Sbjct 26759 CAATATAGGAGCCAGTGGCACGGATGCGGTGGACATTGAGACCAATGCCTCCGGCCATCT 26818
Query 146244 TGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC--GCTTCG 146301
|||| || ||| ||| ||| || || ||||| || || |||||||| ||||
Sbjct 26819 TGGAGATCATGGCACAGGTCTTGAGGGTGTCATAGATACCCTCGATGCTATCCTCCTTC- 26877
Query 146302 AATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAACAACGT 146361
||| | | || |||||||| ||| ||| ||| ||||| || || ||| | ||
Sbjct 26878 -ATGTCCACTAGGAAGCACGATGACAGCTGTGCCTGAGGCGTGCCGGCGTTGAATAGAGT 26936
Query 146362 CGGGCTCGCGTGCGT-AAACATTTTTCGGCTCATCATCCGATACGTTTCGA-TAGCGTCT 146419
||| ||||| || || | || | || | | || || || | | | |||
Sbjct 26937 CGGCGAAGCGTGTGTGAAGAACTTGTTGGAGAGGTAGTTG-TAGGTCTCCAGAACCCTCT 26995
Query 146420 TGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCCGCTCC 146479
| |||| ||| || ||||| | ||||| ||||| |||||||| || ||||||||
Sbjct 26996 CG-ATGTTGTCTCCCCAGATGCCAACGGCGACACGCATCAGCATGTGCTGTGGCCGCTCG 27054
Query 146480 GCCACTTGATTGTCAATCTTTAACAAATAGCCGTTCTCCAGGGTTTTGTATCCGAAAAAT 146539
| || | || | ||| | | ||| | ||||||||| ||| | ||||| ||
Sbjct 27055 ACGACCTTGCCGTTGAGCTTGAGGAGATACGAGCGCTCCAGGGTCTTGAAGCCGAAGTAT 27114
Query 146540 TTGTACGTATAGTCTACGGCATGGTCGATAGC 146571
| ||| |||||| | ||| | |||| ||
Sbjct 27115 TGGTATTGGTAGTCTCGGTCATAGACGATGGC 27146
>seq757
Length=325751
Score = 134 bits (148), Expect = 1e-26
Identities = 167/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||||| || | || | ||| |||||||| ||||||||||| ||| |
Sbjct 30060 CCACCACGCAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAC 30001
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| |||||| ||||||||||| || |||| | ||||||||||| || |||
Sbjct 30000 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCTGGGGGG 29941
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| |||||| ||||| | || | || |||| ||||| |
Sbjct 29940 ATGCCCTCCTTGTCCTGGATTTTGGCCTTGACATTGTCGATGGTGTCGGATGACTCCACC 29881
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236
|| | ||| | || || || || || || || ||||| ||||||||||
Sbjct 29880 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGA 29832
>seq1543
Length=161075
Score = 132 bits (146), Expect = 5e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||||||||| || || | ||||||||||| ||||||||||| ||
Sbjct 71486 CCACCACGCAGACGCAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCTGAG 71545
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||||| ||||||||||| ||| |||| | |||||||||||| || |||
Sbjct 71546 AGTGTCCGGCCATCCTCCAGCTGCTTGCCCGCGAAGATGAGACGCTGCTGGTCTGGTGGG 71605
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || || ||| | | || | ||||| | |||||||
Sbjct 71606 ATACCCTCCTTGTCCTGAATCTTGGCCTTCACGTTGTCAATTGTATCCGAAGACTCGACC 71665
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|||| || | ||| || ||||| || || || ||||| |||||||||
Sbjct 71666 TCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 71713
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || |||| ||| || || | || | ||| |||||||| || |||||||| |||
Sbjct 71942 CCGCCACGCAGACGGAGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 72001
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| |||||| ||||||||||| ||| | || | ||||||||||| ||||||
Sbjct 72002 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGAGGG 72061
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || || ||| | | || | || |||| ||||||||
Sbjct 72062 ATGCCCTCCTTGTCCTGAATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGGACTCGACC 72121
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || ||||| || || || ||||| ||||||||
Sbjct 72122 TCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 72168
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||||||||| | || || || | || | || |||||||| || |||||||| |||
Sbjct 71713 GCCACCGCGGAGGCGAAGGACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGA 71772
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| ||| || |||||| |||||||| || || |||| | ||||||||||| || ||
Sbjct 71773 GAGGGTACGGCCGTCCTCGAGCTGCTTTCCAGCAAAGATGAGGCGCTGCTGGTCTGGGGG 71832
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || ||||| || || ||| | | || | || |||| ||||||||
Sbjct 71833 GATACCCTCCTTGTCCTGAATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGGACTCGAC 71892
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||| | ||| || ||||| || || || ||||| ||||||||
Sbjct 71893 CTCGAGGGTGATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 71940
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471999123429120
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