Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryphonectria_20radicalis_20[genbank_20GCA_5F002179595.1_202017-06-
08] 2,318 sequences; 41,022,676 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq1933 500 2e-136
seq1567 291 2e-73
>seq1933
Length=42650
Score = 500 bits (554), Expect = 2e-136
Identities = 1248/1875 (67%), Gaps = 70/1875 (4%)
Strand=Plus/Plus
Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800
||||||| | || || | || |||| ||| | |||||||||||||| |||||||| |
Sbjct 25289 TGAACTGAATCGGGGCTGCCGCCGCCTGGGTGCGGAGGTAGTACATGCCAGTCTTGAGAC 25348
Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860
| ||| || || ||||||| ||| | ||| ||| || |||
Sbjct 25349 CCAGCTTCCATCCGGTGAAGTGCATGCTCGTGATCTTGCCCATA--GAA-----GGT--- 25398
Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCC-CGCTCTGCG 243919
|| | || || ||| |||||||| |||||||| ||| | |||| || || |||
Sbjct 25399 --TCACGCATGTGGATGTTCAGGGACTGAGACTGGTCGATGAAAG-CGCCACGGTCGGCG 25455
Query 243920 GCCATGGTGATGA-GGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAG 243978
||||| || || |||||| ||| || ||||| | | |||||||||| || |||||
Sbjct 25456 GCCATCTGGACGATGGTCCT-CTGCGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGAT 25514
Query 243979 GTGCTCGGGGAACCCTTCGA-TGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGC 244037
| || |||| | | ||| ||||||| | || || | | | |||||| || |
Sbjct 25515 ATCATCCGGGATGC-TGCGAATGTTCTGGATAGAACCATCCTCGGCGATGATGCGGTTCT 25573
Query 244038 GCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCACCA 244097
|| || ||| |||||| || | || | || ||| || ||| ||| ||||
Sbjct 25574 TCAGGTCCTCGGACCACAGACCACACTGCACAAGGTCCTTGAGCAGCCATGGGTTGACCA 25633
Query 244098 CCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGC 244157
|||| ||||| || | ||||| || |||||||||| |||| || ||||| | ||
Sbjct 25634 CCTGGAACTCACCAGCGAGCACACGCCGCTGGTAGATGTTGGACGTGTAGGGCTCAAAGC 25693
Query 244158 TCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGAC 244217
||| |||||||||| ||||||| || ||||| ||||| |||| || || || |
Sbjct 25694 ACTCGTTGTTGCCCAGGATCTGCGAGGTCGAGGCAGTGGGCATAGGCGCCATCAACAAGC 25753
Query 244218 TGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCG 244277
|||| | ||||| ||| || ||| | | || ||| ||||||||| | | |||
Sbjct 25754 TGTTGCGGACGCCATGCTGCTTGATCTTGGCCTTCAGGGCGTCCCAGTCCCAGAGGTCCG 25813
Query 244278 AGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGC 244337
|| | | | |||| | |||||||||| |||| || | |||| |||||
Sbjct 25814 AGGGCT--TGACGTT----GTCCCACATGTCGTACTGAAGGATACCCTGAGAAACGGGAG 25867
Query 244338 TGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGG 244397
|||||||| | | |||||||||||| || ||| | | || || |||||
Sbjct 25868 ATCCCTCGTACGACAAGTAGGGACCGTCCACCTTGGCAATGTCGCACGATGCGGTGAGGG 25927
Query 244398 CGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTT-GCCGCAGGTG 244456
|||||| |||||||||||| |||||| |||||||| | ||||||| | || | |
Sbjct 25928 CGGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTCAGCTGACGGGCCTCAGGCG-ACTCG 25986
Query 244457 AAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGT 244516
||||| | || | || |||| | || ||||| ||||| ||||| | |||||| ||
Sbjct 25987 AAGGGCAGGCGGAGAGCCAAGAAGGCATCAGCCAGACCCTGAACGCCCACGCCGATAGGG 26046
Query 244517 CTGTGTCGCTTGTTGGAGC-GCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCAC 244575
| ||| ||| ||||| | || | || | || || || || ||||| |||| |
Sbjct 26047 CGGTGGCGCATGTTGCTGTTGCGAGCCTCCTGG-ACAGGATAGTAGTTGATATCGACGAT 26105
Query 244576 CTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTC 244635
|||||| ||||||||| || | || ||| ||| ||||||||| |||| |||
Sbjct 26106 CTTGTTCAGGTTGCGGACGACAACTTGGGTGACTTCGTGCAGCAGCTGGAAGTTGTAGCA 26165
Query 244636 GTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTT 244695
|| | || | | ||| | |||| ||||||| | ||||||||
Sbjct 26166 GTCGTTCTCATAGTCGACG------------AACTGAGGCAGGGCGATGGACGCCAGGTT 26213
Query 244696 GCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCA 244755
|||||| || ||||| || | | | ||||| || ||||| ||||||||||| ||
Sbjct 26214 GCAGACAGCAACCTCGTCAGGGGCAGAGTACTCGATGATCTCCGTGCAGAGGTTGGAGCT 26273
Query 244756 CTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCAT 244815
|||||||||||||| || || ||| |||| |||| | ||||||||| |||||
Sbjct 26274 GCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGGCGTGGTCCTTGTACAGCAT 26333
Query 244816 GAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTT 244875
||| || ||||||||| ||| || |||||| | | ||| || | | |||||
Sbjct 26334 GAATGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGATGGCATACCACAGCTTCTGTGCCTT 26393
Query 244876 GACCGTCCTGCGAGCCTTG-CCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGG 244934
| || || | ||| | ||||| ||| || ||||| ||||||||||||
Sbjct 26394 CAAGGT-CTTCTGGCCGCGACCCTCGCGCTCATACTTCTCGTACAAGGCCTCGAACTCCT 26452
Query 244935 GGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGC 244994
||| || ||| | |||||||| ||| |||||||| || |||| ||||||
Sbjct 26453 CGCCGTAGCAGTCGGCCAGGCCGGGACACTCGTTGGGGCACATAAGGGTCCAGTCGCCGT 26512
Query 244995 CGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGG 245054
| || || | || ||||||||| || ||||||||||||||| |||||||||| | |
Sbjct 26513 TCTTCTCCACACGCTTCATGAAGAGATCAGGGATCCAGAGGGCCAGGAAGAGGTCACGAG 26572
Query 245055 TCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGT 245114
| ||| ||| || |||||| | ||| || | || || ||||| || |||
Sbjct 26573 CACGGACCTCTTCCTTTCCGTGGTTCTTGCGCAGGTCGAGGAACTCGAAGACATCAGCGT 26632
Query 245115 GCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCA 245174
|||| ||||||| ||||| || | ||| ||||| ||||||||||| |||||||| |
Sbjct 26633 GCCACGGCTCCAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGA--- 26689
Query 245175 TCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCG 245230
| | ||||| |||||||| ||||| | || | ||||| ||||| ||||
Sbjct 26690 -CGTAGCGAGCAGTGTTGTTGAAGACACGCAGCATGGGGATGATGCCATTAGACGTGCCG 26748
Query 245231 TTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACAT----GCCTAG 245286
|||||||| || |||| ||| || | | || ||| | ||||||| || |
Sbjct 26749 TTGGTGCCGGCAATATAGGAGCCAGTGGCAC---GGATGC-GGTGGACATTGAGACCAAT 26804
Query 245287 TCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCAT 245346
|| ||||| ||||||||| | ||| ||| |||||| |||||| || ||||| ||
Sbjct 26805 GCCTCCGGCCATCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCATAGATACCCTCGAT 26864
Query 245347 GCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGA 245406
||| ||| |||||||| | || ||||| || |||||||| | || || ||| |
Sbjct 26865 GCTATCCTCCTTCATGTCCACTAGGAAGCACGATGACAGCTGTGCCTGAGGCGTGCCGGC 26924
Query 245407 GTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTG 245466
|||||| ||||| || ||||| || ||| | | | |||||| | ||| ||||
Sbjct 26925 GTTGAATAGAGTCGGCGAAGCGTGTGTGAAGAACTTGTTGGAGAGGTAGTTGTAGGTCTC 26984
Query 245467 GAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCTG 245526
|| | ||||||||||| || ||| | |||| | ||| || |||||||
Sbjct 26985 CAGAACCCTCTCGATGTTGTCTCCCCAGATGCCAACGGCGACACGCATCAGCATGTGCTG 27044
Query 245527 GGGCGTCTCGATGGGTCCCTCGGGTCCCTTGAGCATG------TAGGAGCGCTCGAGCGT 245580
||| ||||| | ||| | || |||||| || || |||||||| || ||
Sbjct 27045 TGGCCGCTCGACG---ACCTTG---CCGTTGAGCTTGAGGAGATACGAGCGCTCCAGGGT 27098
Query 245581 CTTGAACCCAAAGTA 245595
|||||| || |||||
Sbjct 27099 CTTGAAGCCGAAGTA 27113
>seq1567
Length=91444
Score = 291 bits (322), Expect = 2e-73
Identities = 383/519 (74%), Gaps = 15/519 (3%)
Strand=Plus/Plus
Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACG 42692
|| |||||| |||||||| |||||||| || | |||||| || | || | ||
Sbjct 45086 CCTTGCATCCGCAAGAAGGCCGACTGGGCTCTGAGGTGGATCCAGGACCGGGAGTCCACC 45145
Query 42693 TTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTC 42752
| || || | || || || || | ||||||||||| ||||||||| |||||||||
Sbjct 45146 TACGCGCAGCGCCTTGTCGCATTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGCGCCTTC 45205
Query 42753 GCCTCCATCTTCTGGCTCAAGCAGAAGGTGTC--GATGCCCGGACTCACCTTCTCGAACG 42810
||||||||||||||||||||| || ||| | |||||| || || |||||||| ||||
Sbjct 45206 GCCTCCATCTTCTGGCTCAAGAAG--CGTGGCCTGATGCCTGGTCTGACCTTCTCCAACG 45263
Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870
| || ||| | |||||||| || |||| ||||| |||||||| |||||||| ||
Sbjct 45264 AGCTGATCTCTCGTGACGAGGGTCTACATACTGACTTCGCCTGCCTGCTGTTCTC---CC 45320
Query 42871 ACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGA 42930
|||| | || |||| ||| |||| || ||| ||||||||||| ||||| | |
Sbjct 45321 ACCTGAACAACCGGCCCAGCAAGCAGCGCGTAGAGGCTATCATCACGGATGCCGTTGTCA 45380
Query 42931 TCGAGAAGGAGTTCCTCACGCAGTCGCTGCCC-GTGTCCCTGGTCGGCATGAACCACGAC 42989
| |||||||||||||| || || | |||||| ||| |||| ||||||||||| | |
Sbjct 45381 TTGAGAAGGAGTTCCTGACTGAGGCCCTGCCCTGTG-GCCTGCTCGGCATGAACGCCACC 45439
Query 42990 CTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCT-GT-GCCAGATGGGTCTC- 43046
|| ||| ||||||| ||| ||||||||||| |||||| || ||| | || |
Sbjct 45440 CTGATGAAGCAGTACATTGAGTTCGTCGCCGACCGTCTCCTCGTCGCC--CTCGGCAACG 45497
Query 43047 AGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGC 43106
|| | ||||||| | | |||||||||||| |||||||||||||| | | |||
Sbjct 45498 AGAAG-GTCTACAAGTCTTCCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGCGGC 45556
Query 43107 AAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145
||||||||||| ||||||||||| || | |||||||||
Sbjct 45557 AAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAG 45595
Score = 127 bits (140), Expect = 4e-24
Identities = 229/333 (69%), Gaps = 5/333 (2%)
Strand=Plus/Plus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||| || ||| |||||| || ||||||||||| |||
Sbjct 44688 ATCTGGCAGATGTACAAGAAGCACGAGGCATCCTTCTGGACTGCTGAGGAGATTGATCTG 44747
Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAA----CGAAAAGTTTTTCCTCAA 42415
|||||||| | || |||| | || | |||| | ||| || | ||| ||
Sbjct 44748 TCCAAGGACCTGCACGACTGGAACA-ACCGCCTGACCAATGACGAGAAATACTTCATCTC 44806
Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475
|||| || |||||||| |||||||| |||||||| ||||| |||||| || | |
Sbjct 44807 CCACATCCTCGCCTTCTTTGCCGCCTCGGACGGCATTGTCAACGAGAACTTGATCGAGCG 44866
Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535
|||| ||||| ||| |||||| || ||||||||||||||||||| ||
Sbjct 44867 CTTCAGCGCTGAGGTTCAGATTCCTGAGGCCCGTTGCTTCTACGGCTTCCAGACCATGAT 44926
Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGT 42595
|||||| | ||||| ||| ||| || ||| || |||| || ||| ||| ||
Sbjct 44927 GGAGAACATCCACTCCGAGACATACTCCCTCCTGATCGACACCTATATCAAGGAGCCTAC 44986
Query 42596 CGAGCGTAACGGGCTGTTCAAGGCCATGGAGAC 42628
| |||| | | |||||||| || || |||||
Sbjct 44987 CCAGCGCACCTACCTGTTCAATGCTATCGAGAC 45019
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944311837771680
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