Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryphonectria_20radicalis_20[genbank_20GCA_5F002179595.1_202017-06- 08] 2,318 sequences; 41,022,676 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq813 123 2e-23 >seq813 Length=186750 Score = 123 bits (136), Expect = 2e-23 Identities = 196/281 (70%), Gaps = 0/281 (0%) Strand=Plus/Plus Query 20372 AACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATA 20431 |||| |||||||||||| |||||||| | | || ||| ||||||||||| | ||| Sbjct 155647 AACATGTGACAGGGCGGCAGCGCCATGATCTTCAGGTCTTTGGGGTTCCACGCGCTCATG 155706 Query 20432 ATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGGTCA 20491 ||||| | | |||| ||| || | | | | | | | || || ||||| Sbjct 155707 ATGATGCGCCGGTCGTACGGGTTCGTCCTGAGCTTGTGTATGACCTCCGCCAGCTGGTCG 155766 Query 20492 AACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCAC 20551 | |||||||| || ||||| | ||||||||||||| | ||||||||||| | |||| Sbjct 155767 ACGCCCTGGCCCGTGTAGTCCGTCCTCGCGTCCACGTACTCGGCCCCAAAGTGGCGCCAC 155826 Query 20552 TGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGCCCGGCC 20611 ||||| ||||| || || || | || ||| || | ||||| ||||| ||| || Sbjct 155827 TGGAAGCCGTACACGGGGCCGAGGTCGCCCACCTCGCGGTGCGAGAGGCCCACGCCGTCC 155886 Query 20612 AGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGACTCC 20652 |||||||| | || || || |||||| |||||||| || Sbjct 155887 AGGAACTCGCGCGACCCGTTGCCGTCCCAGATCTTGACGCC 155927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441360011223120