Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryphonectria_20radicalis_20[genbank_20GCA_5F002179595.1_202017-06- 08] 2,318 sequences; 41,022,676 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1567 104 5e-17 >seq1567 Length=91444 Score = 104 bits (114), Expect = 5e-17 Identities = 174/252 (69%), Gaps = 0/252 (0%) Strand=Plus/Plus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 |||||||| || || |||| | || ||||| ||| | || || | || || | Sbjct 45359 ATCATCACGGATGCCGTTGTCATTGAGAAGGAGTTCCTGACTGAGGCCCTGCCCTGTGGC 45418 Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || | ||||||||| | || ||| |||||||| || ||||| |||||||| | Sbjct 45419 CTGCTCGGCATGAACGCCACCCTGATGAAGCAGTACATTGAGTTCGTCGCCGACCGTCTC 45478 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 || |||| || || | ||||| || ||||| || |||||||| | ||| |||||| Sbjct 45479 CTCGTCGCCCTCGGCAACGAGAAGGTCTACAAGTCTTCCAACCCCTTCGACTTCATGGAG 45538 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGC 243741 ||| || ||| || || || ||||||||||| |||||||| |||| || || Sbjct 45539 AACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAGAAG 45598 Query 243742 CCTGGTGTGATG 243753 ||||||| ||| Sbjct 45599 GCTGGTGTCATG 45610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102847245153300