Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryphonectria_20radicalis_20[genbank_20GCA_5F002179595.1_202017-06-
08] 2,318 sequences; 41,022,676 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq1933 264 1e-65
seq1057 82.4 9e-11
>seq1933
Length=42650
Score = 264 bits (292), Expect = 1e-65
Identities = 1100/1712 (64%), Gaps = 34/1712 (2%)
Strand=Plus/Plus
Query 113565 TGAACTGAAT-GGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGC 113623
|||||||||| ||| || ||| |||| | |||||||||||||| || ||||||||
Sbjct 25289 TGAACTGAATCGGGGCT-GCCGCCGCCTGGGTGCGGAGGTAGTACATGCCAGTCTTGAGA 25347
Query 113624 CCCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTC---C 113680
||| ||||||| | | ||||| | | |||| | | || ||| |
Sbjct 25348 CCCAGCTTCCATCCGGTGAAGTGCATGCTCGTGATCTTGCCCATAGAAGG---TTCACGC 25404
Query 113681 ATGAAGAGGTTCATACTTTGGGATTGATCGATGAA-GCGTCCACGATCCGCCGCCATATC 113739
||| || ||||| || || || |||||||| ||| ||||| || || ||||| |
Sbjct 25405 ATGTGGATGTTCAGGGACTGAGACTGGTCGATGAAAGCG-CCACGGTCGGCGGCCATCTG 25463
Query 113740 AATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGG 113799
| | | || | ||| ||||| || || |||||||| ||| |||||||| ||
Sbjct 25464 GACGATGGTCCTCTGCGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATATCATCCGG 25523
Query 113800 GATATCCACGA-TATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCT 113858
||| | ||| | || ||||| || ||| || | || ||| | | ||||| ||||
Sbjct 25524 GATG-CTGCGAATGTTCTGGATAGAACCATCCTCGGCGATGATGCGGTTCTTCAGGTCCT 25582
Query 113859 TTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATGCTTATTGACAACAACAAA 113916
||||| |||||| || || |||| | || ||| | |||| || ||
Sbjct 25583 CGGACCACAGACCACACTGCACAAGGTCCTTGAGCAGCCATGGGT--TGACCACCTGGAA 25640
Query 113917 CTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATT 113976
|||||| ||||| || | | | ||||| |||| |||||| |||||||||||||| ||
Sbjct 25641 CTCACCAGCGAGCACACGCCGCTGGTAGATGTTGGACGTGTAGGGCTCAAAGCACTCGTT 25700
Query 113977 GTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACG 114036
||| |||| ||| || | ||| ||||| |||||||| || ||||| | | |||||| ||
Sbjct 25701 GTTGCCCAGGATCTGCGAGGTCGAGGCAGTGGGCATAGGCGCCATCAACAAGCTGTTGCG 25760
Query 114037 GAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCT- 114095
|| || | | | | || |||| |||||||||||||| || | | | ||
Sbjct 25761 GACGCCATGCTGCTTGATCTTGGCCTTCAGGGCGTCCCAGTCCCAGAGGTCCGAGGGCTT 25820
Query 114096 --CCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGT 114153
| | |||||| || |||| |||||||| || || | || |||||||| | |
Sbjct 25821 GACGTTGTCCCACATGTCGTACTGAAGGATACCCTGAGAAACGGGAGATCCCTCGTACGA 25880
Query 114154 CTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACAT 114213
| ||| || || || |||| || | ||| | || |||||| ||||| || ||
Sbjct 25881 CAAGTAGGGACCGTCCACCTTGGCAATGTCGCACGATGCGGTGAGGGCGGCGTGGTAGAT 25940
Query 114214 TGTCTCAAAAATGCGAGCATTCA-TTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGC 114272
|||||||| || | |||| || | |||||| || || || | || |||
Sbjct 25941 GGTCTCAAAGATCTGCTTGTTCAGCTGAC-GGGCCTCAGGCGACTCGAAGGGCAGGCGGA 25999
Query 114273 ACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATAT 114332
| || |||| || ||||| || || || | ||| || ||||| || | ||| |
Sbjct 26000 GAGCCAAGAAGGCATCAGCCAGACCCTGAACGCCCACGCCGATAGGGCGGTGGCGCATGT 26059
Query 114333 TAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTT 114392
| || ||||| || || ||||| | || |||||| | | | || || ||
Sbjct 26060 TGCTGTTGCGAGCCTCCTGGACAGGATAGTAGTTGATATCGACGATCTTGTTCAGGTTGC 26119
Query 114393 TGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT 114452
| |||||| | |||| ||| || ||| | | | | | | | |||| | |
Sbjct 26120 GGACGACAACTTGGGTGACTTCGTGCAGCAGCTGGAAGTTGTAGCAGTCGTTCTCATAGT 26179
Query 114453 TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAG 114512
||| ||| ||| |||||||| |||||||| || || |||| ||| || |||
Sbjct 26180 CGACGAACTGAGGCAGGGCGATGGACGCCAGGTTGCAGACAGCAACCTCGTCAGGGGCAG 26239
Query 114513 TGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGAT 114572
|||||| || || ||||| || | || || || |||||||||| |||||| || |
Sbjct 26240 AGTACTCGATGATCTCCGTGCAGAGGTTGGAGCTGCGGATGGTGCCCAGGTTCTTCTGGT 26299
Query 114573 TTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGG 114632
| ||| ||| |||||||| |||||| |||| | || ||||| || || |
Sbjct 26300 TGCTCTTGCGGTTGGCGTGGTCCTTGTACAGCATGAATGGGTTGCCGGTCTCGGTCTGCG 26359
Query 114633 ACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCC 114691
|| ||| || || | ||| | | || | | || || || | | | || |||||
Sbjct 26360 CCTCGAGGATGGCATACCACAGCTTCTGTGCCT-TCAAGGTCTTCTGGCCGCGACCCTCG 26418
Query 114692 TCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGT 114751
||| ||||| ||| | ||| || ||||| || || | || | || || ||
Sbjct 26419 CGCTCATACTTCTCGTACAAGGCCTCGAACTCCTCGCCGTAGCAGTCGGCCAGGCCGGGA 26478
Query 114752 GCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGG 114811
|| | ||||| | || | ||| | || || ||| |||||||||||||||||
Sbjct 26479 CACTCGTTGGGGCACATAAGGGTCCAGTCGCCGTTCTTCTCCACACGCTTCATGAAGAGA 26538
Query 114812 TCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTG 114871
|| ||||||||||| || |||||| || ||| || | ||||| | || || ||
Sbjct 26539 TCAGGGATCCAGAGGGCCAGGAAGAGGTCACGAGCACGGACCTCTTCCTTTCCGTGGTTC 26598
Query 114872 AGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATT 114931
|||| || | || || | || ||| ||||||||||| |||||||| | || |
Sbjct 26599 TTGCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCACGGCTCCAGGTAGATGGCAAAG 26658
Query 114932 G-AC-----CCCTTACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACG 114985
| || | ||| | | ||| |||||| || || | || ||| || || ||
Sbjct 26659 GCACCGGGGCGCTT--GTTG-CCACCCTGGTCGACGTAGCGAGCAGTGTTGTTGAAGACA 26715
Query 114986 CGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTG 115045
|| ||||| || ||||| |||| ||| ||| || || || |||| || | ||
Sbjct 26716 CGCAGCATGGGGATGATGCCATTAGACGTGCCGTTGGTGCCGGCAATATAGGAGCCAGTG 26775
Query 115046 GCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCAC 115105
|| | || |||| | | |||||| || || ||| ||| ||||| || ||
Sbjct 26776 GCACGGATGCGGTGGACATTGAGACCAATGCCTCCGGCCATCTTGGAGATCATGGCACAG 26835
Query 115106 TCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAG 115165
| |||| || | ||||| || ||||| || |||| | | | ||||||||
Sbjct 26836 GTCTTGAGGGTGTCATAGATACCCTCGATGCTATCCTCCTTCATGTCCACTAGGAAGCAC 26895
Query 115166 CTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAAC 115225
|||| |||| | || || || |||||||| || || || | ||||| ||||
Sbjct 26896 GATGACAGCTGTGCCTGAGGCGTGCCGGCGTTGAATAGAGTCGGCGAAGCGTGTGTGAAG 26955
Query 115226 ATACCT-TGGGACATCTTATCGTAGGTCTCCA 115256
| || | | ||| | | | |||||||||||
Sbjct 26956 A-ACTTGTTGGAGAGGTAGTTGTAGGTCTCCA 26986
>seq1057
Length=53502
Score = 82.4 bits (90), Expect = 9e-11
Identities = 175/259 (68%), Gaps = 2/259 (1%)
Strand=Plus/Plus
Query 10966 GGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCACGGGCAACTTCAAAGAT 11025
||| ||||| || || ||||| ||||| || || || | ||||| ||||||
Sbjct 21602 GGCATCAATCTCGTCAATGAAGACGATGCAGGGCGCGTTCTTCCGGGCCTGCGCAAAGAG 21661
Query 11026 ATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGGCGGCG-GAAC 11084
|| || |||||| |||||||||||| |||||||| || || || | || | || ||
Sbjct 21662 GTCGCGCACTCTCGAGGCACCGACACCGACAAACATCTCGACGAATTCGGAGCCGCTGAC 21721
Query 11085 ATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCG 11144
| | || ||| || ||| || ||||| ||| | || |||||| || ||||| || |
Sbjct 21722 ACT-GAAGAACGGCACGCCCGACTCACCGGCGGTCGCCTTGGCGAGCAGCGTCTTACCAG 21780
Query 11145 TCCCAGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACCACTTCCAAAGTAGC 11204
| || || || | | | ||| ||||| || ||| |||| || || | |||
Sbjct 21781 TACCGGGCGGGCCAGACAAGATGGCGCCACGCGGAATCTTGGCGCCGAGTCGCTGGAAGC 21840
Query 11205 GCTCAGGTTGTTTAAGGAA 11223
|||| || || || |||||
Sbjct 21841 GCTCCGGCTGCTTCAGGAA 21859
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597336291679440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |