Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryphonectria_20radicalis_20[genbank_20GCA_5F002179595.1_202017-06-
08] 2,318 sequences; 41,022,676 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq1933 376 2e-99
>seq1933
Length=42650
Score = 376 bits (416), Expect = 2e-99
Identities = 1097/1666 (66%), Gaps = 35/1666 (2%)
Strand=Plus/Minus
Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777
||| | ||||| | |||||| || |||||| ||||| ||||||||| | | |||| |
Sbjct 27119 TACCAATACTTCGGCTTCAAGACCCTGGAGCGCTCGTATCTCCTCAAGCTCAACGGCAAG 27060
Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837
|| |||||| || || || |||||||||| |||||| | || || || || ||
Sbjct 27059 GTCGTCGAGCGGCCACAGCACATGCTGATGCGTGTCGCCGTTGGCATCTGGGGAGACAAC 27000
Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACC 93897
|| || ||| || | | | || || | ||||| | || || |
Sbjct 26999 ATCGAGAGGGTTCTGGAGACCTACAACTACCTCTCCAACAAGTTCTTCACACACGCTTCG 26940
Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACG 93957
||||| || |||||||| || || || | ||||| |||| ||||| ||||| ||
Sbjct 26939 CCGACTCTATTCAACGCCGGCACGCCTCAGGCACAGCTGTCATCGTGCTTCCTAGTGGAC 26880
Query 93958 AACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCA 94017
| |||| || |||| || || | |||| ||||||| |||||| | |||||
Sbjct 26879 ATGAAGGAGGATAGCATCGAGGGTATCTATGACACCCTCAAGACCTGTGCCATGATCTCC 26820
Query 94018 AAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATC 94077
|| || || || || || ||| ||||||| | | ||||||| || ||||| ||
Sbjct 26819 AAGATGGCCGGAGGCATTGGTCTCAATGTCCACCGCATCCGTGCCACTGGCTCCTATATT 26760
Query 94078 CGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCG 94137
||| ||||| ||||| || || ||| || |||| ||||| || |||||||||||| |
Sbjct 26759 GCCGGCACCAACGGCACGTCTAATGGCATCATCCCCATGCTGCGTGTCTTCAACAACACT 26700
Query 94138 GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAG 94197
|| |||||||| ||||||||||| | | | ||| | || || |||| || |||
Sbjct 26699 GCTCGCTACGTCGACCAGGGTGGCAACAAGCGCCCCGGTGCCTTTGCCATCTACCTGGAG 26640
Query 94198 CCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTG 94257
|| |||||||| || || | ||| |||||||||| ||||||||||| || || |
Sbjct 26639 CCGTGGCACGCTGATGTCTTCGAGTTCCTCGACCTGCGCAAGAACCACGGAAAGGAAGAG 26580
Query 94258 GAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTC 94317
| | || | ||||||||| || |||||| | || || || || ||||| || ||
Sbjct 26579 GTCCGTGCTCGTGACCTCTTCCTGGCCCTCTGGATCCCTGATCTCTTCATGAAGCGTGTG 26520
Query 94318 GAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTT 94377
||||| ||| || ||||| ||| | || ||||| || |||||||| ||| |||||
Sbjct 26519 GAGAAGAACGGCGACTGGACCCTTATGTGCCCCAACGAGTGTCCCGGCCTGGCCGACTGC 26460
Query 94378 TGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGC-AGGG-CAAGGCCAGGA 94435
| || | || || | |||||| | || | | ||| |||| | ||||| ||
Sbjct 26459 TACGGCGAGGAGTTCGAGGCCTTGTACGAGAAGTATG-AGCGCGAGGGTCGCGGCCA-GA 26402
Query 94436 AGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTA 94495
|| || | || |||||||||| || ||| | || | ||| ||||| || |
Sbjct 26401 AGACCTTGAAGGCACAGAAGCTGTGGTATGCCATCCTCGAGGCGCAGACCGAGACCGGCA 26342
Query 94496 CGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGG 94555
|| | ||| ||| ||||||| | |||| |||| ||||||| || |||| ||
Sbjct 26341 ACCCATTCATGCTGTACAAGGACCACGCCAACCGCAAGAGCAACCAGAAGAACCTGGGCA 26282
Query 94556 TGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTG 94615
||| ||||| || || ||||| ||||| ||||||| || | || |||||| |||
Sbjct 26281 CCATCCGCAGCTCCAACCTCTGCACGGAGATCATCGAGTACTCTGCCCCTGACGAGGTTG 26222
Query 94616 CTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGA-GATGCCTACACGTCT 94674
|||| || ||||||| |||||| |||| | ||||| ||| ||| ||| ||
Sbjct 26221 CTGTCTGCAACCTGGCGTCCATCGCCCTGCCTCAGTTCGT-CGACTATG--AGAACGACT 26165
Query 94675 ACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTGAACCTG 94734
|| | | ||| | ||| | | ||| || | | | ||| ||||||
Sbjct 26164 GCTACAAC-TTCCAGCTGCTGCA-----CGAA-GTCACCCAAGTTGTCGTCCGCAACCTG 26112
Query 94735 AACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGAAG 94794
|||| | | |||| | |||| ||| || |||| |||||| ||| ||| ||
Sbjct 26111 AACAAGATCGTCGATATCAACTACTATCCTGTCCAGGAGGCTCGCAACAGCAACATGCGC 26052
Query 94795 CATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTCTG 94854
|| || || |||||| | ||||| |||||| | || || || | || | || |||
Sbjct 26051 CACCGCCCTATCGGCGTGGGCGTTCAGGGTCTGGCTGATGCCTTCTTGGCTCTCCGCCTG 25992
Query 94855 CCCTACGACTCTGTCGAC-GCGGCGGGT---TTGAATTTGAACATATTCGAAAGCATTTA 94910
|||| ||| |||| | | ||| || |||| | | || || || | ||| ||
Sbjct 25991 CCCTTCGA----GTCGCCTGAGGCCCGTCAGCTGAACAAGCAGATCTTTGAGACCATCTA 25936
Query 94911 TTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAATC 94970
||| ||| | | ||| | || | |||| || | ||| || || ||
Sbjct 25935 CCACGCCGCCCTCACCGCATCGTGCGACATTGCCA---AGGTGGACGGTCCCTACTTGTC 25879
Query 94971 GTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGG---GTGTGAA 95027
|| | ||||| ||| | ||||| || |||||| |||| | |||| || ||
Sbjct 25878 GTACGAGGGATCTCCCGTTTCTCAGGGTATCCTTCAGTACGACATGTGGGACAACGTCAA 25819
Query 95028 GCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAA 95087
|||||||| || | |||||||| || || || | | | | || || ||
Sbjct 25818 GCCCTCGGACCTCTGGGACTGGGACGCCCTGAAGGCCAAGATCAAGCAGCATGGCGTCCG 25759
Query 95088 AAACGCGCTGCTTG-TGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACA 95146
||| ||| ||| |||| || |||||||| ||||| || |||||||||| |||||||
Sbjct 25758 CAAC-AGCTTGTTGATGGCGCCTATGCCCACTGCCTCGACCTCGCAGATCCTGGGCAACA 25700
Query 95147 ACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAAT 95206
|||||| || || |||| ||| |||||| | ||| | |||| |||||||| || || |
Sbjct 25699 ACGAGTGCTTTGAGCCCTACACGTCCAACATCTACCAGCGGCGTGTGCTCGCTGGTGAGT 25640
Query 95207 TCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTG-GGTGTGTGGGGTGAC 95265
||| || ||||| || || |||||| | | || ||| ||||| ||
Sbjct 25639 TCCAGGTGGTCAACCCATGGCTGCTCAAGGACCTTGTG-CAGTGTGGTCTGTGGTCCGAG 25581
Query 95266 AAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCA-AATACC 95324
| | ||||||| | | || | || || |||||||||| |||| || ||
Sbjct 25580 GACCTGAAGAACCGCATCATCGCCGAGGATGGTTCTATCCAGAACAT-TCGCAGCATCCC 25522
Query 95325 GGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAG 95370
||| || |||||||| |||||||||||||| ||||||||| |||||
Sbjct 25521 GGATGATATCAAGGCCCTCTACAAGACCGTCTGGGAGATCTCGCAG 25476
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494708865395280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |