Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryphonectria_20radicalis_20[genbank_20GCA_5F002179595.1_202017-06-
08] 2,318 sequences; 41,022,676 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq1933 134 2e-26
>seq1933
Length=42650
Score = 134 bits (148), Expect = 2e-26
Identities = 447/683 (65%), Gaps = 13/683 (2%)
Strand=Plus/Plus
Query 203839 CTTGTCCACCGTGAACTGAAT-GGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACATG 203896
|| ||| || ||||||||||| || | | || | ||||| | | || |||||||||
Sbjct 25278 CTGGTCGACTGTGAACTGAATCGGGGCTGCCGCC--GCCTGGGTGCGGAGGTAGTACATG 25335
Query 203897 CCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTG 203956
|| ||||| || ||| || ||| ||| | ||||||| | | |||| ||
Sbjct 25336 CCAGTCTTGAGACCCAGCTTCCATCCGGTGAAGTGCATGCTCGTGATCTTGCCCATAGAA 25395
Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGC 204015
|| || |||||| |||||||| ||||| |||||||||||| ||||| || || ||
Sbjct 25396 GGTTCACGCATGTGGATGTTCAGGGACTGAGACTGGTCGATGAAA-GCGCCACGGTCGGC 25454
Query 204016 GGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGT 204075
|||||| | || |||||| ||||||| |||||||| || |||||| | | | | || |
Sbjct 25455 GGCCATCTGGACGATGGTCCTCTGCGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGAT 25514
Query 204076 GTGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCC 204134
| | || | || | | || || ||| || || | ||||| || | | ||
Sbjct 25515 ATCATCCGGGA-TGCTGCGAATGTTCTGGATAGAACCATCCTCGGCGATGATGCGGTTCT 25573
Query 204135 TCGTCTCCTCCCCCCACATGCCCAACCTG-ATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193
|| ||||| ||||| | ||| ||| | || ||| | ||| |||||||
Sbjct 25574 TCAGGTCCTCGGACCACA-GACCACACTGCACAAGGTCCTTGAGCAGCCATGGGTTGACC 25632
Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253
| ||| || || || | ||||| | || | | | |||| ||| | || || ||
Sbjct 25633 ACCTGGAACTCACCAGCGAGCACACGCCGCTGGTAGATGTTGGACGTGTAGGGCTCAAAG 25692
Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313
|||||||||||| | ||||| | ||| ||| |||||||| || |||| | || |
Sbjct 25693 CACTCGTTGTTGCCCAGGATCTGCGAGGTCGAGGCAGTGGGCATAGGCGCCATCAACAAG 25752
Query 204314 GAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCA 204373
|||||| || || | | | || | || |||||| | | |||||| | |
Sbjct 25753 CTGTTGCGGACGCCATGCTGCTTGATCTTGGCCTTCAGGGCGTCCCAGTCCCAGAGGTCC 25812
Query 204374 CTGGGTTTCAC---GCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCC 204430
||| || || | ||||||||||| |||||| ||| || ||| || || |||
Sbjct 25813 GAGGGCTTGACGTTGTCCCACATGTCGTACTGAAGGATACCCTGAGAAACGGGAGATCCC 25872
Query 204431 TTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGA 204490
| ||||| | || || ||| | | || | | |||||| |||| | ||||
Sbjct 25873 TCGTACGACAAGTAGGGACCGTCCACCTTGGCAATGTCGCACGATGCGGTGAGGGCGGCG 25932
Query 204491 TAGTACATGGTCTCAAAGATCTG 204513
| ||| |||||||||||||||||
Sbjct 25933 TGGTAGATGGTCTCAAAGATCTG 25955
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795132160378080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |